Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06177 Brassica carinata HOM05D006327 ORTHO05D007952 3.4e-43 177.9 90 100.0
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 3.7e-26 121.3 63 95.2
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 2.0e-19 99.0 63 79.4
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 1.7e-18 95.9 63 77.8
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 2.2e-18 95.5 63 77.8
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.9e-17 92.4 65 76.9
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 1.9e-17 92.4 65 76.9
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 1.9e-17 92.4 65 76.9
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.9e-17 92.4 65 76.9
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 1.9e-17 92.4 65 76.9
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 3.6e-13 78.2 63 68.3
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 6.2e-13 77.4 59 74.6
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.1e-12 76.6 63 68.3
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 2.4e-12 75.5 63 65.1
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 3.1e-12 75.1 63 66.7
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 6.9e-12 73.9 64 60.9
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 2.1e-08 62.4 75 52.0
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 4.6e-08 61.2 71 54.9
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 3.9e-07 58.2 70 52.9
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 6.6e-07 57.4 67 52.2
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 6.6e-07 57.4 67 52.2
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 6.6e-07 57.4 67 52.2
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 6.6e-07 57.4 67 52.2
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 8.7e-07 57.0 65 53.8
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 8.7e-07 57.0 66 56.1
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.1e-06 56.6 67 53.7
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 1.5e-06 56.2 57 59.6
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.5e-06 56.2 67 53.7
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 2.5e-06 55.5 65 50.8
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 3.3e-06 55.1 65 53.8
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 4.3e-06 54.7 75 49.3
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 4.3e-06 54.7 67 53.7
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 5.6e-06 54.3 71 50.7
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 5.6e-06 54.3 67 49.3
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 9.6e-06 53.5 71 52.1
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 9.6e-06 53.5 67 49.3


User provided reference genes

Program Settings