Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06000 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-47 191.8 92 100.0
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-28 129.4 107 63.6
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-27 125.9 107 62.6
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 8.5e-26 120.2 108 59.3
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 8.5e-26 120.2 108 59.3
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-25 119.4 108 59.3
C05p32800 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-25 117.5 107 59.8
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-25 117.5 108 58.3
BolC3t14258H Brassica oleracea HOM05D000353 ORTHO05D000174 5.5e-25 117.5 108 58.3
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 4.7e-24 114.4 105 58.1
BcaB06g27107 Brassica carinata HOM05D000353 ORTHO05D000174 6.1e-24 114.0 107 53.3
BcaB02g11010 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-23 112.5 107 56.1
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 4.0e-23 111.3 107 56.1
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 4.0e-23 111.3 107 56.1
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 5.2e-23 110.9 103 57.3
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 5.2e-23 110.9 103 57.3
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 8.8e-23 110.2 107 53.3
BcaC02g10672 Brassica carinata HOM05D000353 ORTHO05D000174 8.8e-23 110.2 107 57.0
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 8.8e-23 110.2 107 56.1
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 8.8e-23 110.2 107 56.1
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 8.8e-23 110.2 107 57.0
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 8.8e-23 110.2 107 57.0
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-22 109.0 105 55.2
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-22 109.0 105 55.2
BcaC06g35296 Brassica carinata HOM05D000353 ORTHO05D000174 3.4e-22 108.2 103 57.3
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-22 107.8 103 55.3
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-22 107.8 103 57.3
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 9.8e-22 106.7 106 54.7
BraA03t14652Z Brassica rapa HOM05D000353 ORTHO05D000174 1.7e-21 105.9 107 52.3
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-21 105.5 106 53.8
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-21 104.0 107 54.2
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 6.3e-21 104.0 107 54.2
BolC7t42278H Brassica oleracea HOM05D000353 ORTHO05D000174 8.3e-21 103.6 100 57.0
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-20 102.1 106 52.8
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-20 102.1 106 52.8
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-20 101.3 104 53.8
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-19 99.8 104 51.9
BcaC07g37519 Brassica carinata HOM05D000353 ORTHO05D000174 5.9e-19 97.4 104 47.1
C01p17330 Brassica napus HOM05D000353 ORTHO05D000174 5.9e-19 97.4 104 47.1
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 6.5e-18 94.0 102 49.0
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-16 89.4 103 44.7
BcaB08g34620 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-15 85.9 97 45.4
BolC3t20719H Brassica oleracea HOM05D000353 ORTHO05D000174 1.8e-15 85.9 94 50.0
C05p49080 Brassica napus HOM05D000353 ORTHO05D000174 3.0e-15 85.1 106 45.3
BolC5t33651H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-15 85.1 106 43.4
BcaC02g08853 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-15 84.7 92 48.9
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 4.0e-15 84.7 106 42.5
BcaC03g16609 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-14 83.2 100 43.0
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-14 82.0 94 50.0
C06p22090 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-14 81.3 100 42.0
BolC6t37396H Brassica oleracea HOM05D000353 ORTHO05D000174 4.4e-14 81.3 100 42.0
BcaC01g00750 Brassica carinata HOM05D000353 ORTHO05D000174 8.3e-13 77.0 101 47.5
A07p36550 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-12 76.3 103 42.7
BcaB08g34953 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-12 75.9 107 38.3
BcaB05g23506 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-12 75.5 98 44.9
A03p66220 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-12 74.7 86 48.8
BraA03t15675Z Brassica rapa HOM05D000353 ORTHO05D000174 4.1e-12 74.7 86 48.8
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.2e-11 73.2 109 39.4
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 1.6e-11 72.8 104 40.4
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.5e-11 71.6 110 39.1
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.9e-10 68.6 114 36.0
Thhalv10026854m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.0e-10 67.8 92 38.0
BcaC08g45255 Brassica carinata HOM05D000353 ORTHO05D000174 2.5e-09 65.5 96 38.5
Thhalv10019671m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.5e-09 65.5 109 34.9
Thhalv10015289m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.3e-09 65.1 109 35.8
Thhalv10023073m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.3e-09 64.7 109 34.9
Thhalv10000424m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.6e-09 64.3 109 35.8
Thhalv10003062m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.6e-09 64.3 109 34.9
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.6e-09 64.3 109 34.9
BolC9t57402H Brassica oleracea HOM05D000353 ORTHO05D000174 7.3e-09 63.9 83 45.8
Thhalv10027522m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.5e-09 63.5 92 34.8
Thhalv10000499m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.2e-08 63.2 109 34.9
BolC8t47058H Brassica oleracea HOM05D000353 ORTHO05D000174 2.8e-08 62.0 31 83.9
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.6e-08 61.6 109 33.9
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 4.7e-08 61.2 52 55.8
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 4.7e-08 61.2 52 55.8
Thhalv10029440m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.7e-08 61.2 109 32.1
A04p07180 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-07 60.1 93 40.9
A07p12890 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-07 60.1 93 40.9
C02p53950 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-07 60.1 93 40.9
BraA09t38076Z Brassica rapa HOM05D000353 ORTHO05D000174 1.0e-07 60.1 93 40.9
Carub.0007s3608 Capsella rubella HOM05D000353 ORTHO05D000174 1.0e-07 60.1 75 41.3
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.0e-07 60.1 90 41.1
A03p68320 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-07 59.7 93 40.9
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 1.8e-07 59.3 52 53.8
A05p24020 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-07 58.9 93 40.9
BolC9t57837H Brassica oleracea HOM05D000353 ORTHO05D017613 2.3e-07 58.9 93 35.5
BcaB08g36042 Brassica carinata HOM05D000353 ORTHO05D000174 3.0e-07 58.5 94 35.1
BolC4t26647H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-07 58.5 31 77.4
BcaC02g08804 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-07 58.2 75 45.3
Carub.0149s0002 Capsella rubella HOM05D000353 ORTHO05D000174 4.0e-07 58.2 89 34.8
C01p30600 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-07 57.8 93 34.4
BraA03t14653Z Brassica rapa HOM05D000353 ORTHO05D000174 6.8e-07 57.4 31 77.4
BcaB03g14381 Brassica carinata HOM05D000353 ORTHO05D000174 8.9e-07 57.0 93 35.5
C05p45110 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 56.6 31 74.2
BolC3t18375H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-06 56.6 93 40.9
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.5e-06 56.2 108 32.4
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 2.6e-06 55.5 77 37.7
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 2.6e-06 55.5 81 37.0
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 3.4e-06 55.1 81 38.3
BolC5t33239H Brassica oleracea HOM05D000353 ORTHO05D000174 7.5e-06 53.9 31 71.0
BcaNung02594 Brassica carinata HOM05D009574 ORTHO05D012637 9.8e-06 53.5 94 33.0
A09p51940 Brassica napus HOM05D000353 ORTHO05D000174 9.8e-06 53.5 84 39.3
C07p39810 Brassica napus HOM05D009574 ORTHO05D000174 9.8e-06 53.5 94 33.0
BolC2t10476H Brassica oleracea HOM05D000353 ORTHO05D000174 9.8e-06 53.5 29 69.0
BolC2t10481H Brassica oleracea HOM05D000353 ORTHO05D000174 9.8e-06 53.5 29 69.0
Lj1g0004030 Lotus japonicus HOM05D000353 ORTHO05D000174 9.8e-06 53.5 84 33.3


User provided reference genes

Program Settings