Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05916 Brassica carinata HOM05D004193 ORTHO05D004862 2.2e-132 476.5 428 100.0
C01p12740 Brassica napus HOM05D004193 ORTHO05D004862 2.3e-118 429.9 432 92.4
BolC1t01251H Brassica oleracea HOM05D004193 ORTHO05D004862 2.3e-118 429.9 432 92.6
BcaC09g51473 Brassica carinata HOM05D004193 ORTHO05D004862 1.2e-109 401.0 377 95.2
Thhalv10025247m.g Eutrema salsugineum HOM05D004193 ORTHO05D004862 9.9e-109 397.9 429 84.8
Sp7g17460 Schrenkiella parvula HOM05D004193 ORTHO05D004862 1.0e-105 387.9 441 85.9
AL7G35490 Arabidopsis lyrata HOM05D004193 ORTHO05D004862 3.0e-105 386.3 386 85.2
AT4G18760 Arabidopsis thaliana HOM05D004193 ORTHO05D004862 5.1e-105 385.6 386 84.7
CARHR225610 Cardamine hirsuta HOM05D004193 ORTHO05D004862 1.9e-104 383.6 386 83.2
BcaB04g18496 Brassica carinata HOM05D004193 ORTHO05D004862 1.4e-102 377.5 429 79.5
BraA08t33388Z Brassica rapa HOM05D004193 ORTHO05D004862 1.2e-101 374.4 429 80.9
BcaC01g00565 Brassica carinata HOM05D004193 ORTHO05D004862 2.6e-101 373.2 431 81.0
C03p81450 Brassica napus HOM05D004193 ORTHO05D004862 2.6e-101 373.2 431 81.0
BolC3t20416H Brassica oleracea HOM05D004193 ORTHO05D004862 2.6e-101 373.2 431 81.0
A08p13970 Brassica napus HOM05D004193 ORTHO05D004862 1.3e-100 370.9 431 80.3
THA.LOC104798441 Tarenaya hassleriana HOM05D004193 ORTHO05D004862 2.6e-93 346.7 386 83.9
Aa31LG6G1470 Aethionema arabicum HOM05D004193 ORTHO05D004862 3.5e-90 336.3 386 83.7
A09p43700 Brassica napus HOM05D004193 ORTHO05D004862 5.6e-80 302.4 189 86.8
BraA01t01950Z Brassica rapa HOM05D004193 ORTHO05D004862 1.0e-76 291.6 188 85.1
Cpa.g.sc7.100 Carica papaya HOM05D004193 ORTHO05D004862 7.1e-75 285.4 390 75.6
Gorai.011G038000 Gossypium raimondii HOM05D004193 ORTHO05D004862 2.1e-66 257.3 386 73.8
Gohir.D10G036100 Gossypium hirsutum HOM05D004193 ORTHO05D004862 1.0e-65 255.0 386 73.6
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 1.3e-65 254.6 390 73.1
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 1.3e-65 254.6 390 73.1
Duzib235G0429 Durio zibethinus HOM05D004193 ORTHO05D004862 3.0e-65 253.4 387 69.5
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 3.9e-65 253.1 384 73.4
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 5.1e-65 252.7 429 68.1
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 6.7e-65 252.3 390 72.6
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 9.7e-64 248.4 380 73.7
Ciclev10015277m.g Citrus clementina HOM05D004193 ORTHO05D004862 1.6e-63 247.7 389 73.8
Atru.chr10.1586 Acer truncatum HOM05D004193 ORTHO05D004862 3.7e-63 246.5 387 68.2
Haze_06190 Corylus avellana HOM05D004193 ORTHO05D004862 3.7e-63 246.5 391 69.6
Cfa000640 Carpinus fangiana HOM05D004193 ORTHO05D004862 6.3e-63 245.7 391 69.8
FAN21G2979 Fragaria x ananassa HOM05D004193 ORTHO05D004862 4.1e-62 243.0 388 71.4
Duzib160G0263 Durio zibethinus HOM05D004193 ORTHO05D004862 9.0e-62 241.9 389 66.3
FvH4_3g07430 Fragaria vesca HOM05D004193 ORTHO05D004862 9.0e-62 241.9 388 70.1
FAN11G0786 Fragaria x ananassa HOM05D004193 ORTHO05D004862 9.0e-62 241.9 388 70.1
CiPaw.09G072000 Carya illinoinensis HOM05D004193 ORTHO05D004862 1.2e-61 241.5 389 66.3
FAN16G2064 Fragaria x ananassa HOM05D004193 ORTHO05D004862 1.2e-61 241.5 388 71.1
Potri.004G059500 Populus trichocarpa HOM05D004193 ORTHO05D004862 1.2e-61 241.5 389 71.7
Sabra04G0038500 Salix brachista HOM05D004193 ORTHO05D004862 2.0e-61 240.7 389 68.9
Sabra11G0057200 Salix brachista HOM05D004193 ORTHO05D004862 2.6e-61 240.4 390 73.1
Sp2g10680 Schrenkiella parvula HOM05D004193 ORTHO05D004862 2.6e-61 240.4 375 74.7
FAN25G3279 Fragaria x ananassa HOM05D004193 ORTHO05D004862 1.0e-60 238.4 388 70.6
Thecc.06G167100 Theobroma cacao HOM05D004193 ORTHO05D004862 1.0e-60 238.4 389 71.7
Duzib192G1038 Durio zibethinus HOM05D004193 ORTHO05D004862 5.0e-60 236.1 448 70.3
Sc05g0007000 Simmondsia chinensis HOM05D004193 ORTHO05D004862 5.0e-60 236.1 387 62.8
AL8G12840 Arabidopsis lyrata HOM05D004193 ORTHO05D004862 6.5e-60 235.7 397 68.5
Gohir.A05G154000 Gossypium hirsutum HOM05D004193 ORTHO05D004862 1.1e-59 235.0 435 64.8
Sabra11G0053600 Salix brachista HOM05D004193 ORTHO05D004862 1.1e-59 235.0 386 73.1
TWI09G0810 Tripterygium wilfordii HOM05D004193 ORTHO05D004862 1.1e-59 235.0 385 65.2
Gohir.D06G138100 Gossypium hirsutum HOM05D004193 ORTHO05D004862 2.5e-59 233.8 390 67.4
Gohir.D05G156801 Gossypium hirsutum HOM05D004193 ORTHO05D004862 3.2e-59 233.4 435 62.5
Manes.17G058300 Manihot esculenta HOM05D004193 ORTHO05D004862 4.2e-59 233.0 390 68.7
Potri.011G069500 Populus trichocarpa HOM05D004193 ORTHO05D004862 5.5e-59 232.6 389 73.3
QL05p048361 Quercus lobata HOM05D004193 ORTHO05D004862 9.4e-59 231.9 387 64.9
PGR042G3004 Punica granatum HOM05D004193 ORTHO05D004862 2.7e-58 230.3 385 70.4
Gorai.010G160400 Gossypium raimondii HOM05D004193 ORTHO05D004862 3.6e-58 229.9 390 66.9
Gohir.A06G132500 Gossypium hirsutum HOM05D004193 ORTHO05D004862 7.9e-58 228.8 389 66.3
MD10G1276600 Malus domestica HOM05D004193 ORTHO05D004862 1.0e-57 228.4 386 65.5
MSTRG.16163 Avicennia marina HOM05D004193 ORTHO05D004862 2.3e-57 227.3 384 65.4
MELO3C007203.2 Cucumis melo HOM05D004193 ORTHO05D004862 2.3e-57 227.3 391 64.5
Nn1g04504 Nelumbo nucifera HOM05D004193 ORTHO05D004862 2.3e-57 227.3 389 66.8
Lj4g0003170 Lotus japonicus HOM05D004193 ORTHO05D004862 5.1e-57 226.1 387 66.7
Sed0000562 Sechium edule HOM05D004193 ORTHO05D004862 8.8e-57 225.3 387 69.0
SalBow8G4302 Salvia bowleyana HOM05D004193 ORTHO05D004862 1.1e-56 224.9 384 70.6
Nitab4.5_0002458g0090 Nicotiana tabacum HOM05D004193 ORTHO05D004862 1.5e-56 224.6 384 65.1
CANSAT21G2377 Cannabis sativa HOM05D004193 ORTHO05D004862 4.3e-56 223.0 383 66.6
Nitab4.5_0000462g0040 Nicotiana tabacum HOM05D004193 ORTHO05D004862 5.7e-56 222.6 384 64.1
ClCG01G023850 Citrullus lanatus HOM05D004193 ORTHO05D004862 7.4e-56 222.2 388 65.5
MELO3C002671.2 Cucumis melo HOM05D004193 ORTHO05D004862 7.4e-56 222.2 387 68.0
Gohir.A10G035400 Gossypium hirsutum HOM05D004193 ORTHO05D004862 7.4e-56 222.2 324 71.9
CsaV3_1G033160 Cucumis sativus L. HOM05D004193 ORTHO05D004862 1.3e-55 221.5 387 68.2
Phvul.006G174100 Phaseolus vulgaris HOM05D004193 ORTHO05D004862 1.3e-55 221.5 385 66.0
TAR626G1977 Trochodendron aralioides HOM05D004193 ORTHO05D004862 1.3e-55 221.5 387 63.8
AT5G45770 Arabidopsis thaliana HOM05D004193 ORTHO05D004862 1.7e-55 221.1 398 67.6
Nn3g21120 Nelumbo nucifera HOM05D004193 ORTHO05D004862 1.7e-55 221.1 387 65.9
Peaxi162Scf00734g00053 Petunia axillaris HOM05D004193 ORTHO05D004862 6.3e-55 219.2 383 68.9
ClCG03G007510 Citrullus lanatus HOM05D004193 ORTHO05D004862 1.4e-54 218.0 387 64.9
Sed0018737 Sechium edule HOM05D004193 ORTHO05D004862 1.8e-54 217.6 443 56.9
arahy.Tifrunner.gnm1.ann1.XVCK9B Arachis hypogaea HOM05D004193 ORTHO05D004862 3.1e-54 216.9 384 70.3
SGA_v2.0_scaffold1G00068 Striga asiatica HOM05D004193 ORTHO05D004862 5.3e-54 216.1 382 67.5
Aqoxy1G02001 Aquilegia oxysepala HOM05D004193 ORTHO05D004862 6.9e-54 215.7 386 64.2
Medtr2g016620 Medicago truncatula HOM05D004193 ORTHO05D004862 6.9e-54 215.7 388 67.8
PGSC0003DMG400026750 Solanum tuberosum HOM05D004193 ORTHO05D004862 9.1e-54 215.3 383 66.1
VMungo0540G1249 Vigna mungo HOM05D004193 ORTHO05D004862 1.2e-53 214.9 385 69.1
Lalb_Chr13g0295201 Lupinus albus HOM05D004193 ORTHO05D004862 1.5e-53 214.5 389 69.4
Glyma.13G227700 Glycine max HOM05D004193 ORTHO05D004862 2.0e-53 214.2 384 68.5
Oeu039891.1 Olea europaea HOM05D004193 ORTHO05D004862 2.0e-53 214.2 384 65.1
Psat7g069000 Pisum sativum HOM05D004193 ORTHO05D004862 2.6e-53 213.8 385 69.6
Sopen03g002060 Solanum pennellii HOM05D004193 ORTHO05D004862 4.5e-53 213.0 383 67.1
CAN.G866.27 Capsicum annuum HOM05D004193 ORTHO05D004862 5.9e-53 212.6 382 64.4
Ca_00456_v3 Cicer arietinum L. HOM05D004193 ORTHO05D004862 5.9e-53 212.6 385 69.4
Glyma.15G084800 Glycine max HOM05D004193 ORTHO05D004862 7.7e-53 212.2 384 69.0
Ah.09g233350 Amaranthus hybridus HOM05D004193 ORTHO05D004862 1.0e-52 211.8 390 66.2
Oeu041745.1 Olea europaea HOM05D004193 ORTHO05D004862 1.0e-52 211.8 384 65.1
Lalb_Chr18g0054701 Lupinus albus HOM05D004193 ORTHO05D004862 1.7e-52 211.1 384 65.4
DCAR_003990 Daucus carota HOM05D004193 ORTHO05D004862 3.8e-52 209.9 386 66.3
DCAR_027987 Daucus carota HOM05D004193 ORTHO05D004862 3.8e-52 209.9 394 62.4
Nitab4.5_0000437g0190 Nicotiana tabacum HOM05D004193 ORTHO05D004862 3.8e-52 209.9 381 65.6
Ca_17907_v3 Cicer arietinum L. HOM05D004193 ORTHO05D004862 1.4e-51 208.0 387 64.1
Carub.0008s0222 Capsella rubella HOM05D004193 ORTHO05D004862 3.2e-51 206.8 446 64.6
RcHm_v2.0_Chr5g0011431 Rosa chinensis HOM05D004193 ORTHO05D004862 7.2e-51 205.7 325 71.4
AUR62027707 Chenopodium quinoa HOM05D004193 ORTHO05D004862 9.4e-51 205.3 383 65.8
PSO675G2498 Papaver somniferum HOM05D004193 ORTHO05D004862 1.2e-50 204.9 389 60.9
PSO541G1278 Papaver somniferum HOM05D004193 ORTHO05D004862 1.6e-50 204.5 389 59.9
Migut.M01015 Erythranthe guttata HOM05D004193 ORTHO05D004862 6.1e-50 202.6 429 57.3
Eucgr.E02765 Eucalyptus grandis HOM05D004193 ORTHO05D004862 6.1e-50 202.6 350 66.3
Lalb_Chr15g0086241 Lupinus albus HOM05D004193 ORTHO05D004862 1.0e-49 201.8 384 63.8
Solyc02g072250.1 Solanum lycopersicum HOM05D004193 ORTHO05D004862 2.3e-49 200.7 381 64.6
HPP92_011510 Vanilla planifolia HOM05D004193 ORTHO05D004862 2.3e-49 200.7 391 59.1
Sed0009063 Sechium edule HOM05D004193 ORTHO05D004862 3.9e-49 199.9 388 58.8
MSTRG.7422 Avicennia marina HOM05D004193 ORTHO05D004862 1.1e-48 198.4 381 57.2
Medtr8g086590 Medicago truncatula HOM05D004193 ORTHO05D004862 2.0e-48 197.6 386 67.6
Sopen02g021230 Solanum pennellii HOM05D004193 ORTHO05D004862 2.0e-48 197.6 381 64.0
TPR.G6739 Trifolium pratense HOM05D004193 ORTHO05D004862 2.0e-48 197.6 387 65.6
TPR.G4517 Trifolium pratense HOM05D004193 ORTHO05D004862 1.7e-47 194.5 376 67.6
Rhsim13G0188600 Rhododendron simsii HOM05D004193 ORTHO05D004862 2.2e-47 194.1 393 60.1
HanXRQChr10g0316731 Helianthus annuus HOM05D004193 ORTHO05D004862 3.7e-47 193.4 395 62.3
Dinv32348 Davidia involucrata HOM05D004193 ORTHO05D004862 4.8e-47 193.0 324 64.8
PGSC0003DMG401028427 Solanum tuberosum HOM05D004193 ORTHO05D004862 1.4e-46 191.4 367 65.4
CAN.G411.59 Capsicum annuum HOM05D004193 ORTHO05D004862 3.1e-46 190.3 381 66.9
Dinv12762 Davidia involucrata HOM05D004193 ORTHO05D004862 4.1e-46 189.9 325 63.7
arahy.Tifrunner.gnm1.ann1.G2PW3U Arachis hypogaea HOM05D004193 ORTHO05D004862 2.0e-45 187.6 324 66.7
arahy.Tifrunner.gnm1.ann1.PWB2GB Arachis hypogaea HOM05D004193 ORTHO05D004862 2.6e-45 187.2 324 66.7
ATR0012G050 Amborella trichopoda HOM05D004193 ORTHO05D004862 7.7e-45 185.7 386 62.2
Lsat_1_v5_gn_1_108121 Lactuca sativa HOM05D004193 ORTHO05D004862 2.2e-44 184.1 390 62.6
Ah.14g087050 Amaranthus hybridus HOM05D004193 ORTHO05D004862 2.9e-44 183.7 325 63.4
AUR62039461 Chenopodium quinoa HOM05D004193 ORTHO05D004862 2.9e-44 183.7 381 62.2
CsaV3_6G051010 Cucumis sativus L. HOM05D004193 ORTHO05D004862 4.2e-43 179.9 325 66.8
Lsat_1_v5_gn_7_24240 Lactuca sativa HOM05D004193 ORTHO05D004862 4.2e-43 179.9 390 56.4
Cc02_g15470 Coffea canephora HOM05D004193 ORTHO05D004862 9.4e-43 178.7 325 64.3
CARHR176210 Cardamine hirsuta HOM05D004193 ORTHO05D004862 3.0e-41 173.7 430 53.5
Lj6g0022713 Lotus japonicus HOM05D004193 ORTHO05D004862 3.9e-41 173.3 381 59.6
Manes.16G042000 Manihot esculenta HOM05D004193 ORTHO05D004862 4.8e-39 166.4 189 51.9
Phvul.002G240100 Phaseolus vulgaris HOM05D004193 ORTHO05D004862 6.3e-39 166.0 399 57.4
BraA07t30082Z Brassica rapa HOM05D004193 ORTHO05D004862 4.1e-38 163.3 159 69.8
SEGI_04477 Sequoiadendron giganteum HOM05D004193 ORTHO05D004862 1.3e-36 158.3 393 54.7
Zm00001eb153350 Zea mays HOM05D004193 ORTHO05D004862 6.5e-36 156.0 392 52.8
ECA236G4320 Erigeron canadensis HOM05D004193 ORTHO05D004862 1.9e-35 154.5 392 53.3
Peaxi162Scf00371g00032 Petunia axillaris HOM05D004193 ORTHO05D004862 2.5e-35 154.1 324 61.7
arahy.Tifrunner.gnm1.ann1.3H0WIW Arachis hypogaea HOM05D004193 ORTHO05D004862 3.0e-33 147.1 344 58.4
Psat1g195760 Pisum sativum HOM05D004193 ORTHO05D004862 8.3e-31 139.0 279 73.8
MBI07_g09546_MAGBIO Magnolia biondii HOM05D004193 ORTHO05D004862 1.1e-30 138.7 265 67.5
Lj1A1174T75 Lonicera japonica HOM05D004193 ORTHO05D004862 7.0e-30 136.0 280 73.6
COL.COLO4_31255 Corchorus olitorius HOM05D004193 ORTHO05D004862 1.9e-27 127.9 247 83.8
HanXRQChr15g0480781 Helianthus annuus HOM05D004193 ORTHO05D004862 3.2e-27 127.1 328 61.3
Prupe.4G065600 Prunus persica HOM05D004193 ORTHO05D004862 1.4e-25 121.7 386 38.1
unitig_8.g4593 Utricularia gibba HOM05D004193 ORTHO05D004862 6.8e-25 119.4 173 45.1
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 2.6e-24 117.5 373 36.5
arahy.Tifrunner.gnm1.ann1.EP0JTS Arachis hypogaea HOM05D004193 ORTHO05D004862 5.7e-24 116.3 301 61.1
CDE02G0812 Ceratophyllum demersum HOM05D004193 ORTHO05D004862 8.3e-23 112.5 335 49.6
SMO198G0069 Selaginella moellendorffii HOM05D004193 ORTHO05D004862 5.4e-22 109.8 405 51.9
CSS0049237 Camellia sinensis var. sinensis HOM05D004193 ORTHO05D004862 2.7e-21 107.5 256 65.2
SMO198G0035 Selaginella moellendorffii HOM05D004193 ORTHO05D004862 2.7e-21 107.5 192 41.1
Solyc03g006050.4 Solanum lycopersicum HOM05D004193 ORTHO05D004862 7.7e-21 105.9 127 52.0
SEGI_20269 Sequoiadendron giganteum HOM05D004193 ORTHO05D004862 3.3e-19 100.5 200 36.5
VMungo1185G0001 Vigna mungo HOM05D004193 ORTHO05D004862 1.7e-15 88.2 115 47.8
Nitab4.5_0008526g0040 Nicotiana tabacum HOM05D004193 ORTHO05D004862 7.0e-14 82.8 87 59.8
Actinidia35595 Actinidia chinensis HOM05D004193 ORTHO05D004862 2.0e-13 81.3 90 54.4
AagrBONN_evm.TU.Sc2ySwM_362.2880 Anthoceros agrestis HOM05D004193 ORTHO05D004862 7.8e-13 79.3 239 31.8
AL2G35820 Arabidopsis lyrata HOM05D004193 ORTHO05D004862 7.8e-13 79.3 48 83.3
AL6G39660 Arabidopsis lyrata HOM05D004193 ORTHO05D004862 7.8e-13 79.3 48 83.3
Glyma.05G159900 Glycine max HOM05D004193 ORTHO05D004862 1.0e-12 79.0 108 59.3
Os01g0750400 Oryza sativa ssp. japonica HOM05D004193 ORTHO05D004862 7.3e-11 72.8 247 58.7
unitig_8.g4592 Utricularia gibba HOM05D004193 ORTHO05D004862 2.1e-10 71.2 94 43.6
BraA09t39829Z Brassica rapa HOM05D004193 ORTHO05D004862 2.3e-09 67.8 38 89.5
Pp3c14_13680 Physcomitrium patens HOM05D004193 ORTHO05D004862 3.1e-09 67.4 161 29.2
ATR0705G001 Amborella trichopoda HOM05D004193 ORTHO05D004862 2.6e-08 64.3 100 62.0


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