Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 6.3e-66 253.8 118 100.0
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 3.0e-47 191.8 113 81.4
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 8.3e-42 173.7 117 68.4
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-41 173.3 117 67.5
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 2.7e-40 168.7 117 66.7
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 6.0e-40 167.5 114 68.4
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-39 166.4 117 66.7
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.4e-20 103.2 98 50.0
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.8e-20 102.8 99 48.5
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 3.1e-20 102.1 112 46.4
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-18 96.7 111 46.8
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-18 96.7 111 46.8
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-18 96.3 81 60.5
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 1.7e-18 96.3 97 52.6
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-18 95.5 115 43.5
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 2.9e-18 95.5 115 43.5
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 3.8e-18 95.1 77 62.3
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 6.4e-18 94.4 77 63.6
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-17 93.6 100 46.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 2.4e-17 92.4 122 39.3
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 2.4e-17 92.4 122 39.3
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 2.4e-17 92.4 122 39.3
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 5.4e-17 91.3 112 45.5
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 7.1e-17 90.9 134 38.8
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-16 89.4 111 45.0
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-16 89.4 111 45.0
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-16 88.6 100 45.0
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 3.5e-16 88.6 81 54.3
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 4.6e-16 88.2 83 56.6
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 4.6e-16 88.2 87 47.1
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 7.9e-16 87.4 82 53.7
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 7.9e-16 87.4 111 43.2
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 1.8e-15 86.3 81 49.4
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 3.9e-15 85.1 73 54.8
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 3.9e-15 85.1 73 54.8
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 3.9e-15 85.1 73 54.8
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 3.3e-14 82.0 112 42.9
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 3.3e-14 82.0 112 42.9
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 4.3e-14 81.6 89 42.7
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 9.6e-14 80.5 80 46.2
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 9.6e-14 80.5 76 50.0
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-13 80.1 94 46.8
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 2.1e-13 79.3 80 48.8
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 3.7e-13 78.6 80 48.8
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 3.7e-13 78.6 80 48.8
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 3.7e-13 78.6 80 48.8
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-12 77.0 80 47.5
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-11 73.6 63 57.1
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-11 73.6 83 47.0
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 3.4e-11 72.0 74 51.4
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 4.2e-09 65.1 99 41.4
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 7.9e-08 60.8 82 39.0
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 2.3e-07 59.3 67 40.3
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 3.0e-07 58.9 100 35.0
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 6.7e-07 57.8 82 37.8
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 8.7e-07 57.4 97 34.0
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-06 57.0 72 40.3
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.5e-06 56.6 82 36.6
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 4.3e-06 55.1 104 35.6


User provided reference genes

Program Settings