Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 1.3e-161 573.5 423 100.0
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 3.3e-133 479.2 428 81.1
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 4.7e-127 458.8 431 79.6
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 1.1e-117 427.6 428 78.0
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 1.1e-117 427.6 428 78.0
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 2.2e-108 396.7 429 73.2
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 5.9e-90 335.5 449 66.4
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 1.1e-88 331.3 447 62.0
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 1.2e-85 321.2 396 67.9
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 1.4e-83 314.3 457 60.4
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 5.8e-61 239.2 336 57.7
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 1.9e-59 234.2 436 54.1
Carub.0006s2273 Capsella rubella HOM05D008799 ORTHO05D010975 9.9e-53 211.8 439 52.4
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 1.0e-49 201.8 446 51.3
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 3.0e-49 200.3 434 51.6
BraA03t09809Z Brassica rapa HOM05D008799 ORTHO05D010975 7.3e-48 195.7 439 53.3
Sp6g32790 Schrenkiella parvula HOM05D008799 ORTHO05D010975 6.2e-47 192.6 434 48.4
BcaB05g21498 Brassica carinata HOM05D008799 ORTHO05D010975 5.3e-46 189.5 437 47.4
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 6.9e-46 189.1 435 49.0
A02p00590 Brassica napus HOM05D008799 ORTHO05D010975 1.5e-45 188.0 435 45.5
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 2.0e-45 187.6 444 53.4
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 3.4e-45 186.8 435 48.0
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 4.5e-45 186.4 445 52.6
Aa31LG3G16460 Aethionema arabicum HOM05D008799 ORTHO05D010975 7.6e-45 185.7 458 41.5
Carub.0006s0914 Capsella rubella HOM05D008799 ORTHO05D010975 3.8e-44 183.3 442 45.2
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 4.2e-43 179.9 445 55.1
BraA02t08970Z Brassica rapa HOM05D008799 ORTHO05D010975 5.4e-43 179.5 280 51.8
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 3.0e-41 173.7 438 41.1
BraA02t05042Z Brassica rapa HOM05D008799 ORTHO05D010975 6.7e-41 172.6 435 43.9
A03p04690 Brassica napus HOM05D008799 ORTHO05D010975 8.7e-41 172.2 431 51.7
A02p40060 Brassica napus HOM05D008799 ORTHO05D010975 2.5e-40 170.6 280 51.8
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 2.5e-40 170.6 438 48.2
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 2.5e-40 170.6 438 48.2
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 1.6e-39 167.9 240 56.7
BcaC03g13324 Brassica carinata HOM05D008799 ORTHO05D010975 2.4e-38 164.1 443 42.4
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 3.4e-37 160.2 248 52.4
C02p60030 Brassica napus HOM05D008799 ORTHO05D010975 1.2e-34 151.8 122 74.6
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 1.8e-33 147.9 421 43.2
C02p04580 Brassica napus HOM05D008799 ORTHO05D010975 1.8e-33 147.9 441 41.0
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 5.6e-32 142.9 451 36.1
BolC2t06418H Brassica oleracea HOM05D008799 ORTHO05D010975 1.3e-31 141.7 436 41.7
BcaC03g17942 Brassica carinata HOM05D008799 ORTHO05D010975 3.1e-30 137.1 109 75.2
Aa31LG11G4080 Aethionema arabicum HOM05D008799 ORTHO05D010975 4.9e-28 129.8 238 44.1
BraA09t36282Z Brassica rapa HOM05D023039 ORTHO05D024601 6.9e-14 82.8 212 36.3
C09p07060 Brassica napus HOM05D023039 ORTHO05D024601 7.9e-10 69.3 173 38.2
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 7.9e-10 69.3 454 35.0
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 1.5e-08 65.1 466 28.5
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 3.3e-08 63.9 485 26.6
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 4.4e-08 63.5 462 27.5
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 7.4e-08 62.8 101 48.5
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 8.2e-07 59.3 473 26.8
Duzib187G1602 Durio zibethinus HOM05D019025 ORTHO05D009846 1.4e-06 58.5 433 35.1
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 1.8e-06 58.2 432 28.5


User provided reference genes

Program Settings