Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05823 Brassica carinata HOM05D006527 ORTHO05D002967 3.6e-45 184.5 91 100.0
BcaB02g06983 Brassica carinata HOM05D006527 ORTHO05D002967 2.6e-27 125.2 88 73.9
BcaC08g46959 Brassica carinata HOM05D006527 ORTHO05D002967 2.6e-27 125.2 88 73.9
BcaC08g46930 Brassica carinata HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
A07p29120 Brassica napus HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
A07p40610 Brassica napus HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
C06p32950 Brassica napus HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
C06p48980 Brassica napus HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
BolC6t38416H Brassica oleracea HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
BolC6t39935H Brassica oleracea HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
BraA07t30551Z Brassica rapa HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
BraA07t31605Z Brassica rapa HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
CARHR068290 Cardamine hirsuta HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
Thhalv10019135m.g Eutrema salsugineum HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
Sp5g30110 Schrenkiella parvula HOM05D006527 ORTHO05D002967 3.4e-27 124.8 88 72.7
Aa31LG4G5200 Aethionema arabicum HOM05D006527 ORTHO05D002967 1.0e-26 123.2 88 70.5
AL2G34860 Arabidopsis lyrata HOM05D006527 ORTHO05D002967 1.3e-26 122.9 88 70.5
AT1G74970 Arabidopsis thaliana HOM05D006527 ORTHO05D002967 1.3e-26 122.9 88 70.5
Carub.0002s2176 Capsella rubella HOM05D006527 ORTHO05D002967 1.3e-26 122.9 88 70.5
COL.COLO4_26388 Corchorus olitorius HOM05D006527 ORTHO05D002967 3.8e-26 121.3 88 71.6
Duzib041G0758 Durio zibethinus HOM05D006527 ORTHO05D002967 4.9e-26 120.9 88 69.3
Gohir.A06G012700 Gossypium hirsutum HOM05D006527 ORTHO05D002967 4.9e-26 120.9 88 70.5
THA.LOC104813852 Tarenaya hassleriana HOM05D006527 ORTHO05D002967 8.4e-26 120.2 88 69.3
Gohir.D06G010100 Gossypium hirsutum HOM05D006527 ORTHO05D002967 1.1e-25 119.8 88 69.3
Gorai.010G013000 Gossypium raimondii HOM05D006527 ORTHO05D002967 1.1e-25 119.8 88 69.3
Eucgr.A00474 Eucalyptus grandis HOM05D006527 ORTHO05D002967 1.9e-25 119.0 88 69.3
Cpa.g.sc64.38 Carica papaya HOM05D006527 ORTHO05D002967 2.5e-25 118.6 88 69.3
ClCG05G019240 Citrullus lanatus HOM05D006527 ORTHO05D002967 4.2e-25 117.9 88 69.3
MELO3C003890.2 Cucumis melo HOM05D006527 ORTHO05D002967 4.2e-25 117.9 88 69.3
Sed0005106 Sechium edule HOM05D006527 ORTHO05D002967 4.2e-25 117.9 88 69.3
Sed0023442 Sechium edule HOM05D006527 ORTHO05D002967 4.2e-25 117.9 88 69.3
Thecc.08G020600 Theobroma cacao HOM05D006527 ORTHO05D002967 7.1e-25 117.1 88 68.2
GSVIVG01009628001 Vitis vinifera HOM05D006527 ORTHO05D002967 7.1e-25 117.1 88 68.2
Ciclev10002470m.g Citrus clementina HOM05D006527 ORTHO05D002967 9.3e-25 116.7 85 69.4
CsaV3_3G044840 Cucumis sativus L. HOM05D006527 ORTHO05D002967 9.3e-25 116.7 86 69.8
Lalb_Chr24g0399081 Lupinus albus HOM05D006527 ORTHO05D002967 1.2e-24 116.3 88 65.9
Phvul.001G017500 Phaseolus vulgaris HOM05D006527 ORTHO05D002967 1.6e-24 115.9 88 65.9
Lalb_Chr22g0355371 Lupinus albus HOM05D006527 ORTHO05D002967 2.1e-24 115.5 88 64.8
Potri.014G039600 Populus trichocarpa HOM05D006527 ORTHO05D002967 2.1e-24 115.5 88 65.9
CiPaw.03G180700 Carya illinoinensis HOM05D006527 ORTHO05D002967 2.7e-24 115.2 88 65.9
DCAR_019501 Daucus carota HOM05D006527 ORTHO05D002967 2.7e-24 115.2 88 67.0
VMungo0647G0161 Vigna mungo HOM05D006527 ORTHO05D002967 2.7e-24 115.2 88 64.8
Atru.chr13.566 Acer truncatum HOM05D006527 ORTHO05D002967 3.5e-24 114.8 88 67.0
DCAR_019496 Daucus carota HOM05D006527 ORTHO05D002967 4.6e-24 114.4 86 68.6
Dinv39370 Davidia involucrata HOM05D006527 ORTHO05D002967 4.6e-24 114.4 88 67.0
Nn1g05128 Nelumbo nucifera HOM05D006527 ORTHO05D002967 4.6e-24 114.4 88 67.0
unitig_46.g17929 Utricularia gibba HOM05D006527 ORTHO05D002967 4.6e-24 114.4 88 68.2
Glyma.14G078100 Glycine max HOM05D006527 ORTHO05D002967 6.0e-24 114.0 88 63.6
Manes.05G164600 Manihot esculenta HOM05D006527 ORTHO05D002967 6.0e-24 114.0 88 65.9
MSTRG.1309 Avicennia marina HOM05D006527 ORTHO05D002967 7.9e-24 113.6 88 67.0
Cfa014653 Carpinus fangiana HOM05D006527 ORTHO05D002967 7.9e-24 113.6 88 64.8
Potri.002G132200 Populus trichocarpa HOM05D006527 ORTHO05D002967 7.9e-24 113.6 88 64.8
SalBow7G0402 Salvia bowleyana HOM05D006527 ORTHO05D002967 7.9e-24 113.6 88 65.9
TAR628G1724 Trochodendron aralioides HOM05D006527 ORTHO05D002967 7.9e-24 113.6 92 64.1
arahy.Tifrunner.gnm1.ann1.IY92E8 Arachis hypogaea HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 63.6
arahy.Tifrunner.gnm1.ann1.Q0UWAF Arachis hypogaea HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 63.6
ECA246G2564 Erigeron canadensis HOM05D000312 ORTHO05D000221 1.0e-23 113.2 88 64.8
FvH4_5g26680 Fragaria vesca HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 65.9
FAN04G2579 Fragaria x ananassa HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 65.9
FAN08G3014 Fragaria x ananassa HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 65.9
FAN13G0536 Fragaria x ananassa HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 65.9
FAN18G1849 Fragaria x ananassa HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 65.9
RcHm_v2.0_Chr7g0217571 Rosa chinensis HOM05D006527 ORTHO05D002967 1.0e-23 113.2 88 65.9
Ca_13327_v3 Cicer arietinum L. HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 63.6
Haze_13225 Corylus avellana HOM05D006527 ORTHO05D002967 1.3e-23 112.8 87 64.4
Migut.C00670 Erythranthe guttata HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 67.0
Glyma.17G247300 Glycine max HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 63.6
HanXRQChr05g0152001 Helianthus annuus HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 63.6
MD09G1065100 Malus domestica HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 65.9
MD17G1058000 Malus domestica HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 65.9
Nn8g41236 Nelumbo nucifera HOM05D006527 ORTHO05D002967 1.3e-23 112.8 88 65.9
CDE02G1101 Ceratophyllum demersum HOM05D006527 ORTHO05D002967 1.8e-23 112.5 88 64.8
Lj5g0023286 Lotus japonicus HOM05D006527 ORTHO05D002967 1.8e-23 112.5 88 64.8
Aqoxy2G03992 Aquilegia oxysepala HOM05D006527 ORTHO05D002967 2.3e-23 112.1 88 63.6
Prupe.4G129500 Prunus persica HOM05D006527 ORTHO05D002967 2.3e-23 112.1 88 64.8
QL02p007223 Quercus lobata HOM05D006527 ORTHO05D002967 2.3e-23 112.1 88 64.8
Sabra02G0103600 Salix brachista HOM05D006527 ORTHO05D002967 2.3e-23 112.1 88 64.8
TWI12G0201 Tripterygium wilfordii HOM05D006527 ORTHO05D002967 2.3e-23 112.1 88 65.9
TWI36G1359 Tripterygium wilfordii HOM05D006527 ORTHO05D002967 2.3e-23 112.1 88 65.9
Cc10_g03510 Coffea canephora HOM05D006527 ORTHO05D002967 3.0e-23 111.7 88 64.8
Hma1.2p1_0023F.1_g015130 Hydrangea macrophylla HOM05D006527 ORTHO05D002967 3.0e-23 111.7 88 64.8
CANSAT25G0523 Cannabis sativa HOM05D006527 ORTHO05D002967 3.9e-23 111.3 88 64.8
EL10As22g24227 Beta vulgaris HOM05D006527 ORTHO05D002967 5.1e-23 110.9 88 63.6
Gorai.N019400 Gossypium raimondii HOM05D006527 ORTHO05D002967 6.7e-23 110.5 81 71.6
Lsat_1_v5_gn_6_113160 Lactuca sativa HOM05D006527 ORTHO05D002967 6.7e-23 110.5 85 67.1
Gohir.D06G010340 Gossypium hirsutum HOM05D006527 ORTHO05D002967 8.7e-23 110.2 81 70.4
BcaB02g06978 Brassica carinata HOM05D006527 ORTHO05D002967 1.1e-22 109.8 76 73.7
Ah.14g084940 Amaranthus hybridus HOM05D006527 ORTHO05D002967 1.5e-22 109.4 85 65.9
AUR62033861 Chenopodium quinoa HOM05D006527 ORTHO05D002967 1.5e-22 109.4 88 62.5
AUR62040078 Chenopodium quinoa HOM05D006527 ORTHO05D002967 1.5e-22 109.4 88 62.5
Hma1.2p1_0023F.1_g015140 Hydrangea macrophylla HOM05D006527 ORTHO05D002967 1.5e-22 109.4 86 65.1
PSO541G3134 Papaver somniferum HOM05D006527 ORTHO05D002967 1.5e-22 109.4 88 62.5
PSO675G1397 Papaver somniferum HOM05D006527 ORTHO05D002967 1.5e-22 109.4 88 62.5
Nitab4.5_0012474g0010 Nicotiana tabacum HOM05D006527 ORTHO05D002967 1.9e-22 109.0 88 62.5
PGR031G0120 Punica granatum HOM05D006527 ORTHO05D002967 1.9e-22 109.0 88 62.5
Sopen04g033370 Solanum pennellii HOM05D006527 ORTHO05D002967 1.9e-22 109.0 88 62.5
Nitab4.5_0000110g0090 Nicotiana tabacum HOM05D006527 ORTHO05D002967 2.5e-22 108.6 88 61.4
Peaxi162Scf02754g00014 Petunia axillaris HOM05D006527 ORTHO05D002967 4.3e-22 107.8 88 61.4
Hund17468 Selenicereus undatus HOM05D006527 ORTHO05D002967 4.3e-22 107.8 88 60.2
PGSC0003DMG400016883 Solanum tuberosum HOM05D006527 ORTHO05D002967 4.3e-22 107.8 88 62.5
Psat6g010760 Pisum sativum HOM05D006527 ORTHO05D002967 5.7e-22 107.5 88 62.5
Lj4A46G95 Lonicera japonica HOM05D006527 ORTHO05D002967 7.4e-22 107.1 88 61.4
TPR.G15769 Trifolium pratense HOM05D000499 ORTHO05D007471 7.4e-22 107.1 85 63.5
MBI16_g13158_MAGBIO Magnolia biondii HOM05D006527 ORTHO05D002967 1.3e-21 106.3 88 61.4
ATR0733G087 Amborella trichopoda HOM05D006527 ORTHO05D002967 1.6e-21 105.9 85 62.4
CAN.G371.119 Capsicum annuum HOM05D006527 ORTHO05D002967 1.6e-21 105.9 88 60.2
Sc15g0006710 Simmondsia chinensis HOM05D006527 ORTHO05D002967 2.2e-21 105.5 90 60.0
Medtr1g021760 Medicago truncatula HOM05D006527 ORTHO05D002967 3.7e-21 104.8 88 59.1
vmacro04487 Vaccinium macrocarpon HOM05D006527 ORTHO05D002967 1.1e-20 103.2 88 59.1
SGA_v2.0_scaffold48G18038 Striga asiatica HOM05D006527 ORTHO05D002967 2.4e-20 102.1 90 57.8
Rhsim07G0234600 Rhododendron simsii HOM05D006527 ORTHO05D002967 9.0e-20 100.1 85 60.0
Zm00001eb058750 Zea mays HOM05D006527 ORTHO05D002967 1.0e-18 96.7 88 52.3
Sabra14G0028700 Salix brachista HOM05D006527 ORTHO05D002967 2.9e-18 95.1 87 55.2
Pp3c12_1790 Physcomitrium patens HOM05D006527 ORTHO05D002967 2.5e-17 92.0 86 53.5
SEGI_34525 Sequoiadendron giganteum HOM05D006527 ORTHO05D002967 7.2e-17 90.5 83 55.4
Mapoly0007s0166 Marchantia polymorpha HOM05D006527 ORTHO05D002967 3.6e-16 88.2 86 52.3
AagrBONN_evm.TU.Sc2ySwM_228.614 Anthoceros agrestis HOM05D006527 ORTHO05D002967 4.6e-16 87.8 83 53.0
CDE09G1425 Ceratophyllum demersum HOM05D006527 ORTHO05D002967 1.0e-15 86.7 76 59.2
SMO118G0313 Selaginella moellendorffii HOM05D006527 ORTHO05D002967 5.7e-14 80.9 86 47.7
CBR_g38598 Chara braunii HOM05D006527 ORTHO05D002967 5.9e-11 70.9 85 43.5
vmacro04488 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 1.1e-09 66.6 65 55.4
Pp3c9_4940 Physcomitrium patens HOM05D006527 ORTHO05D002967 1.4e-09 66.2 69 46.4
Duzib093G1490 Durio zibethinus HOM05D006527 ORTHO05D002967 6.1e-08 60.8 34 73.5


User provided reference genes

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