Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 4.7e-127 458.0 252 100.0
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 1.5e-104 383.3 254 83.1
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 3.6e-103 378.6 254 83.5
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 9.9e-101 370.5 250 81.6
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 3.8e-100 368.6 250 80.8
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 3.8e-100 368.6 250 80.8
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 9.3e-99 364.0 250 80.0
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 1.6e-98 363.2 250 83.6
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 3.7e-95 352.1 251 81.7
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 5.3e-94 348.2 255 78.4
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 2.6e-93 345.9 255 78.4
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 4.5e-93 345.1 254 78.3
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 1.2e-90 337.0 224 86.2
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 1.9e-88 329.7 285 66.7
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 3.1e-86 322.4 254 74.8
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 2.2e-84 316.2 218 83.9
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 6.5e-84 314.7 224 82.1
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 3.1e-78 295.8 261 65.5
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 7.7e-61 238.0 253 53.8
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.9e-60 236.1 260 51.5
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 8.5e-60 234.6 260 51.9
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 1.1e-59 234.2 260 51.9
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 7.2e-59 231.5 250 52.8
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 1.2e-58 230.7 255 55.7
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 1.2e-58 230.7 259 52.1
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 1.6e-58 230.3 210 56.7
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 1.4e-57 227.3 249 55.4
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 5.2e-57 225.3 259 51.4
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 2.6e-56 223.0 256 49.6
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 4.4e-56 222.2 259 52.5
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 4.4e-56 222.2 253 51.0
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 2.8e-55 219.5 261 52.5
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 2.8e-55 219.5 256 50.8
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 1.8e-54 216.9 175 61.1
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 2.4e-54 216.5 166 63.9
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 5.3e-54 215.3 211 56.9
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 2.0e-53 213.4 176 63.1
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 3.5e-53 212.6 260 48.5
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 7.7e-53 211.5 256 51.6
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 7.7e-53 211.5 222 54.1
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 5.0e-52 208.8 253 49.0
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 1.1e-51 207.6 258 49.2
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 1.1e-51 207.6 175 60.6
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.1e-51 207.6 246 48.8
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 1.9e-51 206.8 212 52.8
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 3.2e-51 206.1 254 50.8
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 7.2e-51 204.9 257 47.1
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 9.4e-51 204.5 247 47.8
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 9.4e-51 204.5 214 51.4
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 1.2e-50 204.1 250 48.8
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 1.2e-50 204.1 256 48.8
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 4.7e-50 202.2 178 59.6
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 6.1e-50 201.8 181 56.9
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 8.0e-50 201.4 212 53.3
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 8.0e-50 201.4 208 53.4
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 1.0e-49 201.1 212 52.4
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 1.4e-49 200.7 210 51.4
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 4.0e-49 199.1 243 47.3
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 4.0e-49 199.1 243 47.3
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 4.0e-49 199.1 241 51.0
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 8.8e-49 198.0 258 46.5
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 8.8e-49 198.0 231 49.4
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 8.8e-49 198.0 176 59.1
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 1.2e-48 197.6 257 47.5
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.5e-48 197.2 210 48.6
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.5e-48 197.2 210 48.6
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 1.5e-48 197.2 205 56.1
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.6e-48 196.4 247 46.2
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.6e-48 196.4 262 46.6
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 2.6e-48 196.4 191 53.4
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 4.4e-48 195.7 255 46.3
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 4.4e-48 195.7 171 58.5
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 5.7e-48 195.3 260 46.9
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 5.7e-48 195.3 258 46.5
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 7.5e-48 194.9 248 44.8
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 9.7e-48 194.5 244 47.5
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 1.3e-47 194.1 209 49.8
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 1.7e-47 193.7 215 49.8
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 4.8e-47 192.2 250 50.4
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 4.8e-47 192.2 212 50.5
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 4.8e-47 192.2 171 57.3
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 4.8e-47 192.2 258 45.3
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.2e-45 187.6 206 49.0
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 2.0e-45 186.8 175 54.3
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 2.7e-45 186.4 186 51.6
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.7e-45 186.4 170 58.8
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 2.7e-45 186.4 252 44.4
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 3.5e-45 186.0 173 56.6
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 4.5e-45 185.7 179 53.1
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.9e-43 180.3 169 52.7
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 3.2e-43 179.5 245 44.9
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 9.4e-43 177.9 209 49.8
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.2e-42 177.6 174 55.7
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 2.7e-42 176.4 179 50.8
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 2.7e-42 176.4 165 54.5
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 1.4e-41 174.1 208 44.2
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.7e-39 167.2 180 50.0
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 3.7e-39 166.0 206 47.6
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 5.9e-37 158.7 182 45.6
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 1.7e-36 157.1 158 50.6
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 1.7e-36 157.1 176 46.0
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 2.9e-36 156.4 170 46.5
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 8.3e-31 138.3 108 63.9
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 4.1e-30 136.0 155 47.7
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 4.5e-29 132.5 138 55.1
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 5.6e-27 125.6 169 42.6
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 2.8e-26 123.2 173 39.3
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 4.7e-26 122.5 136 44.9
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 8.0e-26 121.7 167 40.1
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 4.9e-23 112.5 116 52.6
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 8.3e-23 111.7 168 41.7
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 1.4e-22 110.9 185 34.6
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 7.8e-21 105.1 169 36.7
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 7.3e-19 98.6 112 52.7
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 6.8e-17 92.0 184 32.6
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 2.0e-16 90.5 55 72.7
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 3.7e-15 86.3 201 32.3
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 7.1e-14 82.0 111 38.7
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 8.6e-12 75.1 167 37.1
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 1.2e-10 71.2 52 57.7
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 5.2e-09 65.9 50 56.0
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 6.8e-09 65.5 49 57.1


User provided reference genes

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