Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 4.0e-91 338.2 185 100.0
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 4.0e-83 311.6 167 94.0
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 4.0e-83 311.6 167 94.0
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 2.6e-82 308.9 167 93.4
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 2.6e-82 308.9 167 93.4
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 1.1e-56 223.8 164 68.9
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 2.8e-52 209.1 167 63.5
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 3.4e-50 202.2 163 62.0
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 1.7e-49 199.9 169 60.9
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 1.1e-48 197.2 163 60.7
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 2.5e-48 196.1 164 61.0
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 2.1e-39 166.4 167 53.3
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 2.7e-39 166.0 168 53.0
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 2.3e-38 162.9 168 52.4
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 2.3e-38 162.9 168 52.4
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 1.5e-37 160.2 168 52.4
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 1.5e-37 160.2 168 52.4
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 1.3e-36 157.1 167 52.1
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 1.1e-35 154.1 168 48.8
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 1.8e-35 153.3 167 48.5
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 4.1e-35 152.1 168 48.8
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 4.1e-35 152.1 168 48.8
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 6.9e-35 151.4 167 48.5
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 9.1e-35 151.0 168 48.2
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 9.1e-35 151.0 168 48.2
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 1.5e-34 150.2 167 47.3
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.5e-34 150.2 155 49.7
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 3.4e-34 149.1 168 47.6
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 1.0e-33 147.5 168 47.0
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 1.3e-33 147.1 166 47.6
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.7e-33 146.7 152 50.0
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 2.0e-29 133.3 167 45.5
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 7.2e-24 114.8 129 45.7
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 2.2e-12 76.6 95 44.2
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 2.8e-12 76.3 152 32.9
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 6.3e-12 75.1 154 35.7
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 8.3e-12 74.7 133 36.1
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 1.8e-11 73.6 133 33.8
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 2.4e-11 73.2 131 38.2
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 2.7e-10 69.7 131 35.1
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 2.7e-10 69.7 139 30.9
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 4.5e-10 68.9 156 30.1
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 1.0e-09 67.8 160 28.8
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 2.3e-09 66.6 131 34.4
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 2.9e-09 66.2 150 32.7
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 2.9e-09 66.2 164 32.9
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 6.5e-09 65.1 153 32.7
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 6.5e-09 65.1 139 32.4
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 8.6e-09 64.7 157 31.8
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 1.5e-08 63.9 156 34.6
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 3.2e-08 62.8 158 27.8
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 3.2e-08 62.8 158 27.8
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 1.6e-07 60.5 158 27.2
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 1.6e-07 60.5 158 27.2
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 6.1e-07 58.5 139 29.5
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.8e-06 57.0 136 28.7
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 4.0e-06 55.8 155 27.1
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 4.0e-06 55.8 136 29.4
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 6.8e-06 55.1 139 29.5


User provided reference genes

Program Settings