Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05246 Brassica carinata HOM05D003238 ORTHO05D003571 1.7e-72 276.2 172 100.0
BcaC01g06458 Brassica carinata HOM05D003238 ORTHO05D003571 1.1e-71 273.5 172 99.4
C03p15230 Brassica napus HOM05D003238 ORTHO05D003571 1.1e-71 273.5 172 99.4
BolC3t13964H Brassica oleracea HOM05D003238 ORTHO05D003571 2.3e-69 265.8 172 97.7
A03p13050 Brassica napus HOM05D003238 ORTHO05D003571 9.2e-66 253.8 172 84.9
BraA03t10615Z Brassica rapa HOM05D003238 ORTHO05D003571 9.2e-66 253.8 172 84.9
BcaB01g04436 Brassica carinata HOM05D003238 ORTHO05D003571 3.1e-61 238.8 171 86.5
Sp6g18700 Schrenkiella parvula HOM05D003238 ORTHO05D003571 4.5e-52 208.4 178 73.0
BcaB05g22307 Brassica carinata HOM05D003238 ORTHO05D003571 6.4e-51 204.5 172 65.1
BcaC03g14186 Brassica carinata HOM05D003238 ORTHO05D003571 4.2e-50 201.8 172 66.3
C02p14700 Brassica napus HOM05D003238 ORTHO05D003571 4.2e-50 201.8 172 66.3
BolC2t07595H Brassica oleracea HOM05D003238 ORTHO05D003571 4.2e-50 201.8 172 66.3
Thhalv10014757m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 3.5e-49 198.7 183 67.8
A10p14320 Brassica napus HOM05D003238 ORTHO05D003571 1.9e-47 193.0 169 75.7
C09p48650 Brassica napus HOM05D003238 ORTHO05D003571 3.7e-46 188.7 172 68.0
BcaC04g20028 Brassica carinata HOM05D003238 ORTHO05D003571 6.2e-46 188.0 174 67.2
BcaB08g36028 Brassica carinata HOM05D003238 ORTHO05D003571 8.1e-46 187.6 169 69.8
BolC9t57711H Brassica oleracea HOM05D003238 ORTHO05D003571 4.0e-45 185.3 172 66.9
A02p08810 Brassica napus HOM05D003238 ORTHO05D003571 6.9e-45 184.5 171 61.4
BraA02t05948Z Brassica rapa HOM05D003238 ORTHO05D003571 6.9e-45 184.5 171 61.4
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 2.4e-42 176.0 173 60.1
Carub.0008s1748 Capsella rubella HOM05D003238 ORTHO05D003571 9.3e-42 174.1 177 71.2
CARHR270740 Cardamine hirsuta HOM05D003238 ORTHO05D003571 7.9e-41 171.0 185 61.1
AT5G57000 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 3.0e-40 169.1 171 71.9
AL8G32890 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 2.1e-38 162.9 171 67.8
THA.LOC104813494 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 1.0e-32 144.1 177 50.8
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.4e-18 97.1 183 42.6
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 1.6e-17 93.6 188 42.0
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 1.6e-17 93.6 188 42.0
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 2.1e-17 93.2 178 44.4
Migut.J00580 Erythranthe guttata HOM05D003238 ORTHO05D003571 8.8e-16 87.8 161 42.2
DCAR_031339 Daucus carota HOM05D003238 ORTHO05D003571 4.4e-15 85.5 161 36.6
DCAR_031341 Daucus carota HOM05D003238 ORTHO05D003571 4.4e-15 85.5 161 36.6
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 1.0e-11 74.3 158 39.2
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.4e-10 70.5 161 40.4
HanXRQChr04g0126171 Helianthus annuus HOM05D003238 ORTHO05D003571 1.9e-10 70.1 125 36.8
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 1.9e-10 70.1 163 38.7
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 7.2e-10 68.2 207 28.5
Aa31LG3G12880 Aethionema arabicum HOM05D003238 ORTHO05D003571 1.2e-09 67.4 52 65.4
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.2e-09 67.4 157 41.4
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.2e-09 67.4 142 33.1
Ciclev10009462m.g Citrus clementina HOM05D003238 ORTHO05D003571 2.1e-09 66.6 143 34.3
SGA_v2.0_scaffold10G05235 Striga asiatica HOM05D002348 ORTHO05D002512 2.1e-09 66.6 210 29.0
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 2.7e-09 66.2 214 34.1
ECA236G3496 Erigeron canadensis HOM05D003238 ORTHO05D003571 6.1e-09 65.1 151 32.5
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 8.0e-09 64.7 207 28.5
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 8.0e-09 64.7 160 40.0
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.0e-08 64.3 207 28.5
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 1.4e-08 63.9 225 27.6
Sabra06G0117100 Salix brachista HOM05D003238 ORTHO05D003571 3.0e-08 62.8 163 35.0
HanXRQChr06g0178591 Helianthus annuus HOM05D003238 ORTHO05D003571 3.9e-08 62.4 133 33.1
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 8.8e-08 61.2 220 26.4
COL.COLO4_18181 Corchorus olitorius HOM05D003238 ORTHO05D003571 8.8e-08 61.2 143 42.0
Lsat_1_v5_gn_8_86760 Lactuca sativa HOM05D003238 ORTHO05D003571 2.0e-07 60.1 133 30.1
TWI63G0468 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 2.0e-07 60.1 216 25.9
unitig_26.g9174 Utricularia gibba HOM05D003238 ORTHO05D003571 2.0e-07 60.1 121 32.2
Os09g0363700 Oryza sativa ssp. japonica HOM05D003238 ORTHO05D003571 2.6e-07 59.7 115 36.5
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 3.3e-07 59.3 125 34.4
ClCG05G000830 Citrullus lanatus HOM05D003238 ORTHO05D003571 4.4e-07 58.9 144 37.5
arahy.Tifrunner.gnm1.ann1.57GLQM Arachis hypogaea HOM05D003238 ORTHO05D003571 5.7e-07 58.5 130 36.9
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 7.4e-07 58.2 152 38.8
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 7.4e-07 58.2 127 44.9
PGR142G0437 Punica granatum HOM05D003238 ORTHO05D003571 7.4e-07 58.2 227 33.5
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 2.2e-06 56.6 127 43.3
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 4.8e-06 55.5 119 43.7
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 4.8e-06 55.5 220 32.3
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 6.3e-06 55.1 180 28.9
Sc14g0000680 Simmondsia chinensis HOM05D051806 ORTHO05D003571 6.3e-06 55.1 95 37.9
Atru.chr7.1621 Acer truncatum HOM05D003238 ORTHO05D003571 8.2e-06 54.7 157 37.6


User provided reference genes

Program Settings