Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05148 Brassica carinata HOM05D028539 ORTHO05D014854 2.2e-32 141.7 75 100.0
BcaB01g04892 Brassica carinata HOM05D000051 ORTHO05D016813 2.3e-21 105.1 74 73.0
BcaB01g04894 Brassica carinata HOM05D000051 ORTHO05D000015 4.4e-20 100.9 66 77.3
AL6G30120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-19 99.0 67 74.6
C03p10650 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-19 98.6 70 74.3
BolC3t13541H Brassica oleracea HOM05D000051 ORTHO05D016813 2.2e-19 98.6 70 74.3
BraA03t10235Z Brassica rapa HOM05D000051 ORTHO05D016813 2.8e-19 98.2 70 75.7
C03p10600 Brassica napus HOM05D000160 ORTHO05D000914 1.8e-18 95.5 66 78.8
A03p09110 Brassica napus HOM05D000051 ORTHO05D016813 2.4e-18 95.1 66 74.2
AT5G18770 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.6e-17 91.7 67 70.1
BcaB01g04556 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-15 84.0 66 66.7
C03p10610 Brassica napus HOM05D000051 ORTHO05D016813 1.6e-14 82.4 69 72.5
A03p09120 Brassica napus HOM05D000051 ORTHO05D014854 2.1e-14 82.0 66 66.7
BraA03t10234Z Brassica rapa HOM05D000051 ORTHO05D016813 2.1e-14 82.0 66 66.7
C03p10630 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-14 80.9 73 65.8
A03p09100 Brassica napus HOM05D000051 ORTHO05D016813 8.0e-14 80.1 65 67.7
BcaB01g04893 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-13 79.7 66 65.2
BcaB01g05272 Brassica carinata HOM05D000051 ORTHO05D016813 1.4e-13 79.3 73 64.4
Thhalv10013420m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-13 79.0 66 66.7
C03p10620 Brassica napus HOM05D000051 ORTHO05D016813 2.6e-12 75.1 73 58.9
AL6G30130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.7e-12 73.9 64 60.9
BolC3t13877H Brassica oleracea HOM05D000051 ORTHO05D000015 7.5e-12 73.6 66 62.1
BraA03t10533Z Brassica rapa HOM05D000051 ORTHO05D016813 7.5e-12 73.6 68 60.3
Sp6g25610 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.4e-10 69.3 64 56.2
A03p12220 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-10 68.6 67 58.2
C03p14330 Brassica napus HOM05D000051 ORTHO05D014854 2.4e-10 68.6 67 58.2
CARHR194210 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.1e-10 68.2 64 54.7
BcaB01g04891 Brassica carinata HOM05D000051 ORTHO05D000015 4.1e-10 67.8 64 56.2
CARHR253510 Cardamine hirsuta HOM05D028539 ORTHO05D014854 4.1e-10 67.8 66 57.6
BcaB01g01769 Brassica carinata HOM05D028539 ORTHO05D014854 7.0e-10 67.0 69 52.2
AT5G18780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.1e-10 66.6 64 54.7
BcaB01g05273 Brassica carinata HOM05D000051 ORTHO05D000015 1.7e-08 62.4 64 51.6
A09p26640 Brassica napus HOM05D000051 ORTHO05D014854 6.5e-08 60.5 66 53.0
BraA09t38237Z Brassica rapa HOM05D000051 ORTHO05D014854 1.1e-07 59.7 66 53.0
C09p33770 Brassica napus HOM05D000051 ORTHO05D014854 2.5e-07 58.5 66 51.5
BolC9t56213H Brassica oleracea HOM05D000051 ORTHO05D014854 2.5e-07 58.5 66 51.5
AL6G47630 Arabidopsis lyrata HOM05D000051 ORTHO05D014854 7.2e-07 57.0 56 58.9
BcaC04g21257 Brassica carinata HOM05D028539 ORTHO05D014854 1.2e-06 56.2 62 51.6


User provided reference genes

Program Settings