Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 1.7e-58 229.2 117 100.0
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 9.1e-41 170.2 119 80.7
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 9.1e-41 170.2 119 80.7
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.2e-40 169.9 119 80.7
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 4.5e-40 167.9 117 80.3
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 4.5e-40 167.9 117 81.2
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 5.9e-40 167.5 119 79.8
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 1.0e-39 166.8 117 80.3
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 1.0e-39 166.8 119 79.0
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.0e-39 166.8 119 79.8
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 1.3e-39 166.4 117 81.2
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 3.8e-39 164.9 119 79.0
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 5.0e-39 164.5 117 80.3
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 6.6e-39 164.1 117 80.3
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 8.6e-39 163.7 119 78.2
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.9e-38 162.5 119 78.2
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 5.5e-38 161.0 119 75.6
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 7.2e-38 160.6 119 76.5
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 9.5e-38 160.2 119 75.6
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 9.5e-38 160.2 112 80.4
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 1.2e-37 159.8 120 78.3
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 1.2e-37 159.8 112 79.5
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 3.6e-37 158.3 119 75.6
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 1.0e-36 156.8 116 73.3
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 1.0e-36 156.8 119 74.8
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.8e-36 156.0 112 78.6
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 1.7e-34 149.4 119 70.6
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 1.7e-34 149.4 119 70.6
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 3.7e-34 148.3 120 67.5
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 4.9e-34 147.9 119 70.6
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.4e-33 146.4 120 66.7
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.8e-33 146.0 120 66.7
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 3.1e-33 145.2 119 68.1
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 4.1e-33 144.8 119 68.1
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 7.0e-33 144.1 119 68.9
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 9.2e-33 143.7 119 68.9
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 1.6e-32 142.9 119 67.2
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 1.6e-32 142.9 119 69.7
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 2.0e-32 142.5 119 68.1
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 2.0e-32 142.5 114 67.5
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 2.7e-32 142.1 119 67.2
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 4.5e-32 141.4 119 66.4
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 1.0e-31 140.2 119 66.4
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 1.0e-31 140.2 119 65.5
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 1.3e-31 139.8 119 66.4
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 1.7e-31 139.4 119 67.2
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 1.7e-31 139.4 119 66.4
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.7e-31 139.4 115 67.0
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 2.3e-31 139.0 119 66.4
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 2.3e-31 139.0 119 63.9
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 2.3e-31 139.0 114 67.5
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 2.3e-31 139.0 114 67.5
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 2.3e-31 139.0 119 64.7
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 2.9e-31 138.7 121 66.1
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.9e-31 138.7 121 66.1
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.9e-31 138.7 121 66.1
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 2.9e-31 138.7 121 66.9
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 2.9e-31 138.7 119 63.9
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 3.8e-31 138.3 115 67.8
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 3.8e-31 138.3 119 63.9
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 3.8e-31 138.3 115 66.1
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 5.0e-31 137.9 119 64.7
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 5.0e-31 137.9 114 66.7
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 8.6e-31 137.1 109 69.7
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 1.1e-30 136.7 115 67.0
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 2.5e-30 135.6 114 67.5
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 2.5e-30 135.6 112 68.8
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 2.5e-30 135.6 112 68.8
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 3.3e-30 135.2 117 64.1
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 4.3e-30 134.8 114 65.8
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 4.3e-30 134.8 112 67.9
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 7.3e-30 134.0 114 65.8
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 9.5e-30 133.7 122 63.9
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 9.5e-30 133.7 107 66.4
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 9.5e-30 133.7 115 65.2
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 9.5e-30 133.7 115 65.2
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 9.5e-30 133.7 112 67.9
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 1.2e-29 133.3 112 67.0
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 1.2e-29 133.3 109 69.7
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 1.6e-29 132.9 119 64.7
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 2.1e-29 132.5 99 76.8
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 2.1e-29 132.5 114 65.8
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 2.8e-29 132.1 115 61.7
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 3.6e-29 131.7 109 68.8
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 3.6e-29 131.7 112 66.1
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 4.7e-29 131.3 115 61.7
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 4.7e-29 131.3 119 62.2
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 8.0e-29 130.6 101 75.2
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 8.0e-29 130.6 101 75.2
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 8.0e-29 130.6 117 60.7
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 8.0e-29 130.6 112 64.3
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 1.8e-28 129.4 96 78.1
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 2.3e-28 129.0 112 67.0
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 3.0e-28 128.6 128 60.2
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 4.0e-28 128.3 117 59.8
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 6.8e-28 127.5 117 59.8
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 6.8e-28 127.5 117 59.0
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 8.9e-28 127.1 121 58.7
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 8.9e-28 127.1 133 57.9
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 1.2e-27 126.7 114 64.0
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 1.5e-27 126.3 95 77.9
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.5e-27 126.3 109 66.1
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 1.5e-27 126.3 119 61.3
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 2.6e-27 125.6 96 75.0
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 2.6e-27 125.6 115 62.6
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 2.6e-27 125.6 117 60.7
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 2.6e-27 125.6 110 62.7
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 3.4e-27 125.2 108 65.7
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 4.4e-27 124.8 108 65.7
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 7.5e-27 124.0 108 65.7
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 7.5e-27 124.0 108 65.7
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 9.8e-27 123.6 107 67.3
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 1.3e-26 123.2 119 58.0
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 1.3e-26 123.2 119 58.0
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 1.3e-26 123.2 115 60.0
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 3.7e-26 121.7 107 64.5
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 4.9e-26 121.3 107 65.4
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 6.4e-26 120.9 110 62.7
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 1.4e-25 119.8 109 61.5
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 3.2e-25 118.6 99 67.7
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 1.2e-24 116.7 109 61.5
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 2.7e-24 115.5 108 61.1
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 6.0e-24 114.4 97 74.2
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 3.9e-23 111.7 95 68.4
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 5.0e-23 111.3 117 59.0
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 5.0e-23 111.3 97 66.0
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 6.6e-23 110.9 97 64.9
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.9e-22 109.4 105 61.9
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 1.9e-22 109.4 97 66.0
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 4.3e-22 108.2 125 54.4
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 4.3e-22 108.2 108 61.1
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 6.2e-21 104.4 111 55.0
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 6.2e-21 104.4 111 55.0
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 6.2e-21 104.4 115 55.7
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 1.1e-20 103.6 122 54.1
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 1.1e-20 103.6 119 52.9
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 2.3e-20 102.4 103 58.3
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 3.1e-20 102.1 97 60.8
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 5.2e-20 101.3 98 62.2
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 5.2e-20 101.3 99 61.6
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 8.9e-20 100.5 116 52.6
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 2.6e-19 99.0 157 44.6
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 3.7e-18 95.1 82 69.5
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 6.4e-18 94.4 107 57.9
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 9.2e-17 90.5 107 54.2
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 4.6e-16 88.2 117 49.6
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 6.0e-16 87.8 107 52.3
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 7.8e-16 87.4 107 51.4
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 1.0e-15 87.0 66 72.7
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.7e-15 86.3 130 46.9
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 1.1e-14 83.6 109 49.5
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 7.3e-14 80.9 63 63.5
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 3.6e-13 78.6 110 48.2
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 6.2e-13 77.8 94 52.1
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.1e-12 77.0 58 65.5
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 1.4e-12 76.6 106 47.2
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 3.4e-11 72.0 117 44.4
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 5.8e-11 71.2 67 58.2
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 1.3e-10 70.1 108 43.5
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 2.9e-10 68.9 37 89.2
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 4.9e-10 68.2 36 94.4
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 8.3e-10 67.4 36 94.4
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 8.3e-10 67.4 89 52.8
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 1.1e-09 67.0 109 45.0
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 2.4e-09 65.9 36 94.4
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 2.7e-08 62.4 36 83.3
arahy.Tifrunner.gnm1.ann1.B18QXV Arachis hypogaea HOM05D003994 ORTHO05D086742 3.9e-07 58.5 69 53.6


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