Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 7.7e-43 176.8 92 100.0
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 1.3e-42 176.0 92 97.8
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 1.3e-42 176.0 92 97.8
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 1.3e-42 176.0 92 97.8
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 1.7e-42 175.6 92 96.7
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.7e-42 175.6 92 97.8
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 5.0e-42 174.1 92 96.7
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 6.5e-42 173.7 92 95.7
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 3.2e-41 171.4 92 96.7
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 3.2e-41 171.4 92 96.7
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 5.5e-41 170.6 92 94.6
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 9.4e-41 169.9 92 94.6
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 6.1e-40 167.2 92 92.4
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 1.7e-37 159.1 92 85.9
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 3.6e-32 141.4 92 84.8
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 4.0e-31 137.9 73 95.9
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 2.2e-29 132.1 92 80.4
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 3.2e-25 118.2 84 67.9
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 3.2e-25 118.2 84 67.9
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 3.2e-25 118.2 84 67.9
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 7.2e-25 117.1 82 69.5
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 2.1e-24 115.5 82 68.3
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 2.1e-24 115.5 82 68.3
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.7e-24 115.2 88 63.6
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 4.7e-24 114.4 84 65.5
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 4.7e-24 114.4 84 65.5
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 4.7e-24 114.4 83 66.3
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 4.7e-24 114.4 82 68.3
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 8.0e-24 113.6 82 65.9
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.0e-23 113.2 84 65.5
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 1.8e-23 112.5 89 64.0
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.8e-23 112.5 84 64.3
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 1.8e-23 112.5 84 64.3
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.8e-23 112.5 82 65.9
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.3e-23 112.1 82 65.9
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 2.3e-23 112.1 82 67.1
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.0e-23 111.7 84 65.5
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.0e-23 111.7 84 65.5
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 3.0e-23 111.7 90 61.1
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 4.0e-23 111.3 82 65.9
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 4.0e-23 111.3 81 65.4
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 4.0e-23 111.3 82 69.5
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 5.2e-23 110.9 90 60.0
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 6.8e-23 110.5 89 62.9
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 6.8e-23 110.5 82 63.4
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 1.2e-22 109.8 82 65.9
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 1.5e-22 109.4 82 65.9
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 2.0e-22 109.0 88 60.2
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 2.6e-22 108.6 82 63.4
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 2.6e-22 108.6 82 61.0
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 2.6e-22 108.6 82 63.4
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.4e-22 108.2 79 67.1
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.4e-22 108.2 79 67.1
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 3.4e-22 108.2 85 62.4
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 3.4e-22 108.2 88 59.1
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 4.4e-22 107.8 82 64.6
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 5.7e-22 107.5 85 62.4
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 7.5e-22 107.1 82 63.4
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 7.5e-22 107.1 84 60.7
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 9.8e-22 106.7 84 60.7
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 9.8e-22 106.7 82 62.2
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 9.8e-22 106.7 82 62.2
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 9.8e-22 106.7 82 64.6
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 1.7e-21 105.9 82 62.2
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 1.7e-21 105.9 87 63.2
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 1.7e-21 105.9 87 59.8
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 1.7e-21 105.9 78 66.7
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 2.2e-21 105.5 82 61.0
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 62.2
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 62.2
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 4.8e-21 104.4 82 61.0
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 4.8e-21 104.4 82 62.2
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 6.3e-21 104.0 82 62.2
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 6.3e-21 104.0 84 58.3
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 8.3e-21 103.6 82 62.2
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 8.3e-21 103.6 82 61.0
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.3e-21 103.6 82 61.0
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.1e-20 103.2 78 65.4
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.4e-20 102.8 81 60.5
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 1.4e-20 102.8 82 58.5
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 2.4e-20 102.1 87 62.1
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 2.4e-20 102.1 82 59.8
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 2.4e-20 102.1 82 59.8
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 2.4e-20 102.1 85 58.8
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 3.1e-20 101.7 82 57.3
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 4.1e-20 101.3 82 59.8
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 9.1e-20 100.1 81 56.8
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 9.1e-20 100.1 82 56.1
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 9.1e-20 100.1 81 58.0
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 1.2e-19 99.8 81 56.8
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.0e-19 99.0 82 57.3
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.7e-19 98.6 82 58.5
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 3.5e-19 98.2 84 53.6
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 4.5e-19 97.8 78 61.5
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 5.9e-19 97.4 82 56.1
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 5.9e-19 97.4 82 56.1
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 5.9e-19 97.4 83 56.6
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.0e-18 96.7 82 56.1
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 1.0e-18 96.7 82 54.9
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.0e-18 96.7 78 60.3
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 1.3e-18 96.3 82 54.9
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 2.9e-18 95.1 82 54.9
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 3.8e-18 94.7 70 64.3
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 5.0e-18 94.4 85 56.5
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 6.5e-18 94.0 69 65.2
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 8.5e-18 93.6 84 51.2
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 5.5e-17 90.9 82 52.4
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 7.2e-17 90.5 82 51.2
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 4.7e-16 87.8 85 50.6
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 8.8e-15 83.6 77 50.6
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 8.3e-13 77.0 67 56.7
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 5.4e-12 74.3 57 59.6
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.6e-11 72.8 85 43.5
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 7.8e-11 70.5 47 70.2
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 3.8e-10 68.2 82 45.1
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.5e-09 66.2 56 60.7
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 4.3e-09 64.7 56 57.1
C02p23080 Brassica napus HOM05D046150 ORTHO05D042944 5.6e-09 64.3 31 96.8
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 1.2e-08 63.2 55 56.4
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 2.1e-08 62.4 66 51.5
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 2.8e-08 62.0 47 61.7
BolC2t08450H Brassica oleracea HOM05D046150 ORTHO05D042944 1.4e-07 59.7 31 90.3
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 4.4e-06 54.7 56 48.2
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.7e-06 54.3 45 53.3


User provided reference genes

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