Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04987 Brassica carinata HOM05D003477 ORTHO05D004043 3.4e-33 144.4 74 100.0
BcaNung04163 Brassica carinata HOM05D003477 ORTHO05D004043 4.3e-20 100.9 102 59.8
BolC1t00438H Brassica oleracea HOM05D003477 ORTHO05D004043 4.3e-20 100.9 99 62.6
C01p04520 Brassica napus HOM05D003477 ORTHO05D004043 9.6e-20 99.8 99 61.6
A01p04150 Brassica napus HOM05D003477 ORTHO05D004043 1.6e-19 99.0 99 61.6
BraA01t00404Z Brassica rapa HOM05D003477 ORTHO05D004043 1.6e-19 99.0 99 61.6
Aa31LG2G16840 Aethionema arabicum HOM05D003477 ORTHO05D004043 5.3e-18 94.0 99 56.6
CARHR105430 Cardamine hirsuta HOM05D003477 ORTHO05D004043 1.1e-15 86.3 102 54.9
AL3G46800 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 4.2e-15 84.3 102 51.0
Aa31LG8G13000 Aethionema arabicum HOM05D003477 ORTHO05D004043 5.4e-15 84.0 102 52.9
AT2G15000 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 2.7e-14 81.6 102 50.0
A03p45360 Brassica napus HOM05D003477 ORTHO05D004043 1.0e-13 79.7 102 51.0
BraA03t13668Z Brassica rapa HOM05D003477 ORTHO05D004043 1.0e-13 79.7 102 51.0
Sp3g28420 Schrenkiella parvula HOM05D003477 ORTHO05D004043 1.0e-13 79.7 102 49.0
Thhalv10026653m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 2.3e-13 78.6 93 53.8
BcaC06g36034 Brassica carinata HOM05D003477 ORTHO05D004043 5.1e-13 77.4 102 48.0
BcaC01g03075 Brassica carinata HOM05D003477 ORTHO05D004043 1.1e-12 76.3 102 48.0
C03p56260 Brassica napus HOM05D003477 ORTHO05D004043 1.1e-12 76.3 102 48.0
BolC3t17914H Brassica oleracea HOM05D003477 ORTHO05D004043 1.1e-12 76.3 102 48.0
Sp7g32050 Schrenkiella parvula HOM05D003477 ORTHO05D004043 6.2e-11 70.5 92 52.2
Thhalv10022939m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 1.4e-10 69.3 94 51.1
Carub.0003s2895 Capsella rubella HOM05D003477 ORTHO05D004043 1.8e-10 68.9 90 52.2
BcaB08g34577 Brassica carinata HOM05D003477 ORTHO05D004043 4.0e-10 67.8 93 48.4
Carub.0007s0610 Capsella rubella HOM05D003477 ORTHO05D004043 1.5e-09 65.9 90 51.1
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 1.5e-09 65.9 102 46.1
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 3.4e-09 64.7 41 73.2
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 4.5e-09 64.3 41 73.2
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 5.8e-09 63.9 41 73.2
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 5.8e-09 63.9 41 73.2
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 7.6e-09 63.5 100 44.0
BcaC01g03076 Brassica carinata HOM05D003477 ORTHO05D004043 1.0e-08 63.2 41 68.3
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 1.0e-08 63.2 101 42.6
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 1.0e-08 63.2 101 43.6
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 1.7e-08 62.4 66 56.1
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 2.9e-08 61.6 41 68.3
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 2.9e-08 61.6 105 43.8
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 2.9e-08 61.6 41 68.3
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 2.9e-08 61.6 43 69.8
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 3.8e-08 61.2 40 70.0
AT4G34265 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 4.9e-08 60.8 93 47.3
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 4.9e-08 60.8 43 62.8
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 6.5e-08 60.5 100 42.0
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 6.5e-08 60.5 100 45.0
Cpa.g.sc106.115 Carica papaya HOM05D003477 ORTHO05D004043 1.1e-07 59.7 92 43.5
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 1.1e-07 59.7 102 42.2
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 1.1e-07 59.7 43 62.8
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 2.5e-07 58.5 101 43.6
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 2.5e-07 58.5 41 65.9
A07p05410 Brassica napus HOM05D003477 ORTHO05D004043 3.2e-07 58.2 91 44.0
C07p08710 Brassica napus HOM05D003477 ORTHO05D004043 3.2e-07 58.2 91 44.0
BolC7t41282H Brassica oleracea HOM05D003477 ORTHO05D004043 3.2e-07 58.2 91 44.0
BraA07t28337Z Brassica rapa HOM05D003477 ORTHO05D004043 3.2e-07 58.2 91 44.0
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 3.2e-07 58.2 104 39.4
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 3.2e-07 58.2 43 65.1
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 4.2e-07 57.8 43 60.5
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 4.2e-07 57.8 43 60.5
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 9.3e-07 56.6 41 65.9
AL7G17010 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 1.2e-06 56.2 92 45.7
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.6e-06 55.8 100 42.0
ATR0315G039 Amborella trichopoda HOM05D003477 ORTHO05D004043 2.1e-06 55.5 44 59.1
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 2.1e-06 55.5 43 55.8
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 2.1e-06 55.5 102 38.2
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 2.1e-06 55.5 102 38.2
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 2.7e-06 55.1 43 65.1
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 4.6e-06 54.3 99 41.4
Sabra09G0072000 Salix brachista HOM05D003477 ORTHO05D004043 4.6e-06 54.3 100 40.0
PGSC0003DMG400024979 Solanum tuberosum HOM05D003477 ORTHO05D004043 4.6e-06 54.3 44 59.1
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 6.0e-06 53.9 41 65.9
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 6.0e-06 53.9 41 65.9
CARHR242520 Cardamine hirsuta HOM05D003477 ORTHO05D004043 7.9e-06 53.5 92 45.7
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 7.9e-06 53.5 41 65.9


User provided reference genes

Program Settings