Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 3.8e-54 214.5 106 100.0
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 2.6e-50 201.8 105 92.4
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 4.4e-50 201.1 105 92.4
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 7.5e-50 200.3 105 91.4
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 1.4e-48 196.1 105 90.5
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 2.2e-46 188.7 105 88.6
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 7.2e-45 183.7 103 84.5
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 1.6e-44 182.6 99 89.9
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 8.0e-44 180.3 99 88.9
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 8.0e-44 180.3 99 88.9
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 8.0e-44 180.3 99 88.9
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 1.0e-43 179.9 102 86.3
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 1.8e-43 179.1 98 88.8
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 5.2e-43 177.6 102 85.3
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.2e-42 176.4 102 83.3
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 3.5e-39 164.9 100 80.0
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 5.9e-39 164.1 101 78.2
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 6.6e-38 160.6 100 77.0
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 5.6e-37 157.5 99 77.8
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 2.8e-36 155.2 100 73.0
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 4.7e-36 154.5 95 76.8
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.0e-35 153.3 99 76.8
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 1.8e-35 152.5 95 76.8
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 1.8e-35 152.5 95 76.8
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 2.3e-35 152.1 95 77.9
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 2.3e-35 152.1 95 76.8
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 3.0e-35 151.8 95 74.7
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 4.0e-35 151.4 99 73.7
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 4.0e-35 151.4 99 72.7
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 6.8e-35 150.6 95 75.8
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 8.9e-35 150.2 100 73.0
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 8.9e-35 150.2 95 74.7
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 8.9e-35 150.2 95 75.8
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 8.9e-35 150.2 95 75.8
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 8.9e-35 150.2 95 75.8
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 8.9e-35 150.2 95 75.8
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.2e-34 149.8 95 75.8
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.2e-34 149.8 100 74.0
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 1.2e-34 149.8 95 75.8
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.0e-34 149.1 90 77.8
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 2.6e-34 148.7 100 72.0
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 2.6e-34 148.7 99 73.7
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 3.4e-34 148.3 95 75.8
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 3.4e-34 148.3 99 73.7
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 4.4e-34 147.9 95 72.6
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 4.4e-34 147.9 99 72.7
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 5.7e-34 147.5 99 73.7
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 1.7e-33 146.0 95 72.6
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.7e-33 146.0 99 75.8
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 2.2e-33 145.6 95 72.6
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 2.2e-33 145.6 99 71.7
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 2.2e-33 145.6 95 73.7
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 2.9e-33 145.2 94 75.5
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.9e-33 145.2 90 75.6
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 2.9e-33 145.2 99 71.7
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 3.7e-33 144.8 86 76.7
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 3.7e-33 144.8 99 69.7
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 3.7e-33 144.8 100 70.0
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 3.7e-33 144.8 100 70.0
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 3.7e-33 144.8 95 74.7
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 4.9e-33 144.4 100 70.0
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 4.9e-33 144.4 100 68.0
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 6.4e-33 144.1 90 74.4
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 6.4e-33 144.1 90 74.4
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 8.3e-33 143.7 97 70.1
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 8.3e-33 143.7 87 77.0
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 8.3e-33 143.7 95 70.5
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 1.1e-32 143.3 99 69.7
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.4e-32 142.9 99 68.7
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.8e-32 142.5 99 70.7
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 1.8e-32 142.5 95 72.6
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.8e-32 142.5 100 71.0
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 1.8e-32 142.5 95 71.6
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 2.4e-32 142.1 95 71.6
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 2.4e-32 142.1 99 71.7
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 3.2e-32 141.7 86 74.4
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 3.2e-32 141.7 87 74.7
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 3.2e-32 141.7 100 67.0
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.2e-32 141.7 96 70.8
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 4.1e-32 141.4 95 70.5
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 5.4e-32 141.0 97 71.1
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 7.0e-32 140.6 95 65.3
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 7.0e-32 140.6 100 68.0
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 7.0e-32 140.6 100 68.0
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 7.0e-32 140.6 95 71.6
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 7.0e-32 140.6 87 73.6
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 7.0e-32 140.6 95 67.4
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 9.2e-32 140.2 95 69.5
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 9.2e-32 140.2 99 68.7
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.2e-31 139.8 100 67.0
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.2e-31 139.8 95 71.6
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 1.2e-31 139.8 95 68.4
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 1.2e-31 139.8 100 66.0
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 1.2e-31 139.8 87 69.0
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.6e-31 139.4 95 65.3
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.6e-31 139.4 100 68.0
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 2.7e-31 138.7 95 71.6
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 3.5e-31 138.3 97 68.0
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 3.5e-31 138.3 95 66.3
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 5.9e-31 137.5 94 66.0
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 7.8e-31 137.1 93 67.7
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 1.0e-30 136.7 95 67.4
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 5.0e-30 134.4 122 57.4
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 6.6e-30 134.0 81 75.3
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 6.6e-30 134.0 87 70.1
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 6.6e-30 134.0 95 64.2
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 8.6e-30 133.7 97 63.9
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 1.5e-29 132.9 83 77.1
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 1.5e-29 132.9 87 69.0
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.9e-29 132.5 95 65.3
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 2.5e-29 132.1 96 67.7
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 2.5e-29 132.1 95 66.3
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 3.3e-29 131.7 106 59.4
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 4.3e-29 131.3 95 66.3
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 5.6e-29 131.0 100 62.0
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 2.1e-28 129.0 89 64.0
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 2.8e-28 128.6 94 62.8
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 6.2e-28 127.5 87 64.4
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.2e-26 123.2 73 79.5
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 3.4e-26 121.7 93 60.2
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 2.2e-25 119.0 93 57.0
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 2.9e-25 118.6 93 58.1
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 2.9e-25 118.6 93 57.0
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 1.1e-19 100.1 63 74.6
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-18 96.3 73 65.8
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 3.4e-18 95.1 91 50.5
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 5.8e-18 94.4 54 75.9
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 8.3e-17 90.5 59 66.1
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 2.4e-16 89.0 62 71.0
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 2.4e-16 89.0 65 63.1
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.1e-15 85.9 60 70.0
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 7.8e-15 84.0 77 53.2
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 7.3e-13 77.4 84 41.7
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 9.5e-13 77.0 90 40.0
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 2.9e-09 65.5 61 62.3
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 1.1e-08 63.5 35 80.0
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.9e-08 62.8 32 84.4
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 1.2e-07 60.1 33 78.8
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 8.6e-06 53.9 33 72.7


User provided reference genes

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