Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04738 Brassica carinata HOM05D000141 ORTHO05D000780 5.7e-56 220.7 114 100.0
BcaNung04737 Brassica carinata HOM05D000141 ORTHO05D000780 2.8e-50 201.8 105 100.0
BcaNung06679 Brassica carinata HOM05D000141 ORTHO05D000780 6.2e-50 200.7 105 99.0
A06p37130 Brassica napus HOM05D000141 ORTHO05D000780 1.4e-49 199.5 105 99.0
C07p41300 Brassica napus HOM05D000141 ORTHO05D000780 1.4e-49 199.5 105 99.0
BolC7t44657H Brassica oleracea HOM05D000141 ORTHO05D000780 1.4e-49 199.5 105 99.0
BraA06t26639Z Brassica rapa HOM05D000141 ORTHO05D000780 1.4e-49 199.5 105 99.0
Thhalv10003600m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 4.7e-42 174.5 104 88.5
CARHR186460 Cardamine hirsuta HOM05D000141 ORTHO05D000780 5.2e-41 171.0 103 84.5
Sp2g21050 Schrenkiella parvula HOM05D000141 ORTHO05D000780 5.2e-41 171.0 106 85.8
AT5G27000 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 1.5e-40 169.5 103 85.4
AL6G38930 Arabidopsis lyrata HOM05D000141 ORTHO05D000780 2.0e-40 169.1 104 83.7
Carub.0006s2462 Capsella rubella HOM05D000141 ORTHO05D000780 7.5e-40 167.2 104 83.7
BolC9t53530H Brassica oleracea HOM05D000141 ORTHO05D000780 5.4e-38 161.0 105 85.7
BcaC04g23660 Brassica carinata HOM05D000141 ORTHO05D000780 1.2e-37 159.8 105 84.8
A09p05560 Brassica napus HOM05D000141 ORTHO05D000780 1.2e-37 159.8 104 83.7
C09p06050 Brassica napus HOM05D000141 ORTHO05D000780 1.2e-37 159.8 105 84.8
BraA09t36197Z Brassica rapa HOM05D000141 ORTHO05D000780 6.0e-37 157.5 104 82.7
Aa31LG11G9700 Aethionema arabicum HOM05D000141 ORTHO05D000780 3.1e-25 118.6 110 67.3
THA.LOC104802785 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 1.1e-22 110.2 93 65.6
Cpa.g.sc48.130 Carica papaya HOM05D000141 ORTHO05D000780 6.4e-15 84.3 112 47.3
BcaB04g19698 Brassica carinata HOM05D000141 ORTHO05D000780 3.5e-13 78.6 63 65.1
THA.LOC104820713 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 3.3e-11 72.0 92 47.8
Aa31LG1G6110 Aethionema arabicum HOM05D000141 ORTHO05D000780 4.3e-11 71.6 96 46.9
Thhalv10006679m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 5.6e-11 71.2 89 51.7
Sp1g07760 Schrenkiella parvula HOM05D000141 ORTHO05D000780 1.3e-10 70.1 68 58.8
CARHR009100 Cardamine hirsuta HOM05D000141 ORTHO05D000780 4.8e-10 68.2 81 54.3
THA.LOC104805909 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 4.8e-10 68.2 118 41.5
QL03p017919 Quercus lobata HOM05D000141 ORTHO05D000780 4.0e-09 65.1 104 40.4
Carub.0001s0848 Capsella rubella HOM05D000141 ORTHO05D000780 5.3e-09 64.7 91 46.2
AL1G19630 Arabidopsis lyrata HOM05D000141 ORTHO05D000780 2.0e-08 62.8 68 57.4
Prupe.6G316600 Prunus persica HOM05D000141 ORTHO05D000780 2.6e-08 62.4 114 39.5
TWI56G1115 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 2.6e-08 62.4 113 40.7
FvH4_6g07070 Fragaria vesca HOM05D000141 ORTHO05D000780 3.4e-08 62.0 116 37.1
AT1G09170 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 4.5e-08 61.6 67 56.7
MD12G1209400 Malus domestica HOM05D000141 ORTHO05D000780 7.6e-08 60.8 102 38.2
MD04G1196400 Malus domestica HOM05D000141 ORTHO05D000780 9.9e-08 60.5 85 42.4
RcHm_v2.0_Chr3g0456621 Rosa chinensis HOM05D000141 ORTHO05D000780 9.9e-08 60.5 114 37.7
Manes.08G113800 Manihot esculenta HOM05D000141 ORTHO05D000780 1.7e-07 59.7 122 38.5
Ciclev10000131m.g Citrus clementina HOM05D000141 ORTHO05D000780 3.8e-07 58.5 105 41.9
TWI36G1075 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 8.4e-07 57.4 116 39.7
Ca_09325_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 1.4e-06 56.6 96 38.5
FAN02G3600 Fragaria x ananassa HOM05D000141 ORTHO05D000780 1.9e-06 56.2 114 36.8
Thecc.05G319100 Theobroma cacao HOM05D000141 ORTHO05D000780 1.9e-06 56.2 94 38.3
CiPaw.08G158200 Carya illinoinensis HOM05D000141 ORTHO05D000780 2.4e-06 55.8 116 36.2
Potri.005G021100 Populus trichocarpa HOM05D000141 ORTHO05D000780 3.2e-06 55.5 108 39.8
BcaC07g38472 Brassica carinata HOM05D000141 ORTHO05D001031 5.5e-06 54.7 80 47.5
C08p12510 Brassica napus HOM05D000141 ORTHO05D000780 5.5e-06 54.7 80 47.5
BolC8t48889H Brassica oleracea HOM05D000141 ORTHO05D000780 5.5e-06 54.7 80 47.5
FAN14G1651 Fragaria x ananassa HOM05D000141 ORTHO05D000780 5.5e-06 54.7 116 34.5
Nn4g25696 Nelumbo nucifera HOM05D000141 ORTHO05D000780 5.5e-06 54.7 105 40.0
Manes.09G174500 Manihot esculenta HOM05D000141 ORTHO05D000780 7.1e-06 54.3 103 38.8
Gorai.013G127500 Gossypium raimondii HOM05D000141 ORTHO05D000780 9.3e-06 53.9 106 39.6


User provided reference genes

Program Settings