Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04712 Brassica carinata HOM05D002743 ORTHO05D002895 2.6e-100 368.6 176 100.0
BcaNung04711 Brassica carinata HOM05D002743 ORTHO05D002895 2.2e-86 322.4 156 98.7
BolC1t01435H Brassica oleracea HOM05D002743 ORTHO05D002895 8.0e-81 303.9 183 81.4
A01p12360 Brassica napus HOM05D002743 ORTHO05D002895 3.7e-78 295.0 194 77.8
BraA01t01181Z Brassica rapa HOM05D002743 ORTHO05D002895 4.2e-74 281.6 183 77.6
C01p14880 Brassica napus HOM05D002743 ORTHO05D002895 2.8e-70 268.9 168 80.4
BcaC09g51280 Brassica carinata HOM05D002743 ORTHO05D002895 2.0e-60 236.1 140 82.9
Thhalv10013759m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 4.6e-44 181.8 163 57.7
AT3G26010 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 5.0e-43 178.3 164 57.3
Carub.0005s0386 Capsella rubella HOM05D002743 ORTHO05D002895 8.6e-43 177.6 164 56.7
AL5G14680 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 7.3e-42 174.5 164 55.5
A01p25990 Brassica napus HOM05D002743 ORTHO05D002895 1.6e-41 173.3 164 53.7
BraA01t02518Z Brassica rapa HOM05D002743 ORTHO05D002895 4.7e-41 171.8 164 53.7
A10p18240 Brassica napus HOM05D002743 ORTHO05D002895 8.1e-41 171.0 161 53.4
BcaB08g37317 Brassica carinata HOM05D002743 ORTHO05D002895 1.4e-40 170.2 161 52.8
BcaC04g19490 Brassica carinata HOM05D002743 ORTHO05D002895 1.4e-40 170.2 161 53.4
C09p55180 Brassica napus HOM05D002743 ORTHO05D002895 1.4e-40 170.2 161 53.4
BraA10t43899Z Brassica rapa HOM05D002743 ORTHO05D002895 3.1e-40 169.1 162 52.5
A10p19880 Brassica napus HOM05D002743 ORTHO05D002895 5.2e-40 168.3 164 52.4
BcaB08g36564 Brassica carinata HOM05D002743 ORTHO05D002895 2.0e-39 166.4 161 51.6
BraA10t43989Z Brassica rapa HOM05D002743 ORTHO05D002895 1.7e-38 163.3 160 51.9
A10p19100 Brassica napus HOM05D002743 ORTHO05D002895 4.9e-38 161.8 160 51.2
BcaC04g19386 Brassica carinata HOM05D002743 ORTHO05D002895 1.2e-36 157.1 164 48.8
BcaB08g36410 Brassica carinata HOM05D002743 ORTHO05D002895 6.0e-36 154.8 147 51.7
C09p56260 Brassica napus HOM05D002743 ORTHO05D002895 5.6e-34 148.3 160 47.5
BraA10t44063Z Brassica rapa HOM05D002743 ORTHO05D002895 5.6e-34 148.3 134 56.0
BraA08t33514Z Brassica rapa HOM05D002743 ORTHO05D002895 9.5e-34 147.5 178 48.9
BolC2t06988H Brassica oleracea HOM05D002743 ORTHO05D002895 8.1e-33 144.4 162 49.4
A02p05860 Brassica napus HOM05D002743 ORTHO05D002895 4.0e-32 142.1 162 50.0
BraA02t05538Z Brassica rapa HOM05D002743 ORTHO05D002895 4.0e-32 142.1 162 50.0
Carub.0007s1819 Capsella rubella HOM05D002743 ORTHO05D002895 1.7e-30 136.7 184 44.0
Carub.0007s1889 Capsella rubella HOM05D002743 ORTHO05D002895 4.9e-30 135.2 173 43.4
AL7G33200 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.4e-29 133.7 118 56.8
CARHR025250 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.3e-27 126.3 173 42.8
BolC2t06987H Brassica oleracea HOM05D002743 ORTHO05D002895 7.3e-26 121.3 132 53.0
Thhalv10027176m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 2.8e-25 119.4 180 40.6
CARHR229890 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.8e-24 116.7 173 42.8
BcaB08g36563 Brassica carinata HOM05D002743 ORTHO05D002895 2.6e-23 112.8 98 55.1
AL1G67480 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.4e-23 112.5 172 41.3
AT4G22430 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 9.9e-23 110.9 167 37.7
A08p15370 Brassica napus HOM05D002743 ORTHO05D002895 1.3e-22 110.5 121 47.9
CARHR147000 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.9e-22 109.4 131 47.3
BolC9t58491H Brassica oleracea HOM05D002743 ORTHO05D002895 1.1e-21 107.5 161 41.0
THA.LOC104823978 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 5.4e-21 105.1 187 35.3
BcaB07g33451 Brassica carinata HOM05D002743 ORTHO05D002895 2.1e-20 103.2 177 39.0
A06p03440 Brassica napus HOM05D002743 ORTHO05D002895 7.8e-20 101.3 177 37.9
BcaC08g43177 Brassica carinata HOM05D002743 ORTHO05D002895 1.3e-19 100.5 176 38.1
BolC6t35599H Brassica oleracea HOM05D002743 ORTHO05D002895 1.3e-19 100.5 176 38.1
C06p04770 Brassica napus HOM05D002743 ORTHO05D002895 3.0e-19 99.4 176 38.1
BraA06t23552Z Brassica rapa HOM05D002743 ORTHO05D002895 1.1e-18 97.4 177 37.9
CARHR040090 Cardamine hirsuta HOM05D002743 ORTHO05D002895 5.6e-18 95.1 181 38.1
Carub.0004s2674 Capsella rubella HOM05D002743 ORTHO05D002895 1.3e-17 94.0 162 35.2
AL1G57560 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.6e-17 93.6 161 41.6
AL3G39670 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.6e-17 93.6 162 37.0
THA.LOC104824016 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 1.6e-17 93.6 174 32.8
BcaB07g33449 Brassica carinata HOM05D002743 ORTHO05D002895 2.1e-17 93.2 179 38.5
Carub.0151s0001 Capsella rubella HOM05D002743 ORTHO05D002895 2.1e-17 93.2 177 37.9
BcaB07g33444 Brassica carinata HOM05D002743 ORTHO05D002895 2.8e-17 92.8 180 38.3
Thhalv10011517m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 2.8e-17 92.8 177 40.1
C09p56250 Brassica napus HOM05D002743 ORTHO05D002895 6.2e-17 91.7 161 35.4
BolC9t58494H Brassica oleracea HOM05D002743 ORTHO05D002895 6.2e-17 91.7 161 35.4
BcaB07g33448 Brassica carinata HOM05D002743 ORTHO05D002895 8.1e-17 91.3 180 36.1
Sp2g04630 Schrenkiella parvula HOM05D002743 ORTHO05D002895 8.1e-17 91.3 185 39.5
AL5G18350 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.1e-16 90.9 174 36.8
BNapus_Darmor_BZH_scaffold_38p02050 Brassica napus HOM05D002743 ORTHO05D002895 1.8e-16 90.1 110 47.3
C09p56220 Brassica napus HOM05D002609 ORTHO05D002820 5.3e-16 88.6 161 34.8
AT1G49990 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 6.9e-16 88.2 162 38.3
C06p04690 Brassica napus HOM05D002743 ORTHO05D002895 3.4e-15 85.9 176 35.8
AL34U10080 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 4.5e-15 85.5 188 31.4
AT3G28223 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 4.5e-15 85.5 173 33.5
BcaC06g36618 Brassica carinata HOM05D002743 ORTHO05D002895 4.5e-15 85.5 166 34.3
BcaC06g36619 Brassica carinata HOM05D002743 ORTHO05D002895 4.5e-15 85.5 166 34.3
AL8G22310 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 7.6e-15 84.7 192 32.8
Sp1g36850 Schrenkiella parvula HOM05D002743 ORTHO05D002895 7.6e-15 84.7 181 38.1
SpUn0137_0030 Schrenkiella parvula HOM05D002743 ORTHO05D002895 7.6e-15 84.7 181 38.1
Thhalv10023522m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 1.7e-14 83.6 185 32.4
CARHR286570 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.2e-14 83.2 179 36.3
AL8G22320 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.9e-14 82.8 188 31.4
BcaC08g43169 Brassica carinata HOM05D002743 ORTHO05D002895 6.4e-14 81.6 176 35.2
BcaB07g31193 Brassica carinata HOM05D002743 ORTHO05D002895 1.2e-12 77.4 186 36.6
AL1G27780 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.6e-12 77.0 176 33.5
CARHR286560 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.1e-12 76.6 172 32.0
AL6G47130 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.7e-12 76.3 174 31.0
BcaC04g22203 Brassica carinata HOM05D002743 ORTHO05D002895 3.5e-12 75.9 187 35.8
C07p02110 Brassica napus HOM05D002743 ORTHO05D002895 3.5e-12 75.9 165 31.5
BolC9t55130H Brassica oleracea HOM05D002743 ORTHO05D002895 3.5e-12 75.9 187 35.8
BcaC08g43170 Brassica carinata HOM05D002743 ORTHO05D002895 4.6e-12 75.5 161 36.0
BcaC06g35666 Brassica carinata HOM05D002743 ORTHO05D002895 7.9e-12 74.7 179 28.5
A07p08150 Brassica napus HOM05D002743 ORTHO05D002895 7.9e-12 74.7 178 32.6
C07p12300 Brassica napus HOM05D002743 ORTHO05D002895 7.9e-12 74.7 179 28.5
C09p22150 Brassica napus HOM05D002743 ORTHO05D002895 7.9e-12 74.7 187 35.8
BolC7t41698H Brassica oleracea HOM05D002743 ORTHO05D002895 7.9e-12 74.7 179 28.5
BraA07t28599Z Brassica rapa HOM05D002743 ORTHO05D002895 7.9e-12 74.7 178 32.0
CARHR131260 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.3e-11 73.2 188 26.6
A09p17800 Brassica napus HOM05D002743 ORTHO05D002895 3.0e-11 72.8 187 35.3
BraA09t37413Z Brassica rapa HOM05D002743 ORTHO05D002895 3.0e-11 72.8 187 35.3
AT1G15680 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 5.1e-11 72.0 178 32.6
AL6G48200 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 8.7e-11 71.2 185 30.3
AL5G16370 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.3e-10 69.3 191 31.9
BcaB03g16763 Brassica carinata HOM05D002743 ORTHO05D002895 3.3e-10 69.3 164 32.9
BcaB06g26601 Brassica carinata HOM05D002743 ORTHO05D002895 3.3e-10 69.3 188 29.3
Thhalv10001535m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 3.3e-10 69.3 148 34.5
Aa31sc58G10 Aethionema arabicum HOM05D002743 ORTHO05D002895 5.6e-10 68.6 196 28.6
BcaC01g00721 Brassica carinata HOM05D002743 ORTHO05D002895 5.6e-10 68.6 109 40.4
C03p83580 Brassica napus HOM05D002743 ORTHO05D002895 5.6e-10 68.6 109 40.4
BolC3t20638H Brassica oleracea HOM05D002743 ORTHO05D002895 5.6e-10 68.6 109 40.4
BNapus_Darmor_BZH_scaffold_38p02040 Brassica napus HOM05D002743 ORTHO05D002895 1.6e-09 67.0 70 50.0
AL5G17810 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.8e-09 66.2 172 31.4
Thhalv10029227m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 3.7e-09 65.9 178 29.2
THA.LOC104805970 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 4.8e-09 65.5 164 28.7
Aa31LG9G5850 Aethionema arabicum HOM05D002743 ORTHO05D002895 6.2e-09 65.1 177 28.2
AL3G39540 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.2e-09 65.1 168 28.6
A09p04310 Brassica napus HOM05D002743 ORTHO05D002895 1.8e-08 63.5 163 31.3
BraA09t36068Z Brassica rapa HOM05D002743 ORTHO05D002895 1.8e-08 63.5 163 31.3
QL02p078505 Quercus lobata HOM05D008898 ORTHO05D001155 6.9e-08 61.6 183 30.1
CARHR100270 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.5e-07 60.5 116 28.4
C09p04580 Brassica napus HOM05D002743 ORTHO05D002895 7.6e-07 58.2 149 30.2
BolC7t40616H Brassica oleracea HOM05D002743 ORTHO05D002895 7.6e-07 58.2 72 38.9
BolC9t53387H Brassica oleracea HOM05D002743 ORTHO05D002895 7.6e-07 58.2 149 30.2
AL5G18360 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.7e-06 57.0 96 40.6
A02p35840 Brassica napus HOM05D002743 ORTHO05D002895 2.9e-06 56.2 79 43.0
BcaC01g00949 Brassica carinata HOM05D002743 ORTHO05D002895 3.8e-06 55.8 133 30.1
C03p86260 Brassica napus HOM05D002743 ORTHO05D002895 3.8e-06 55.8 133 30.1


User provided reference genes

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