Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04707 Brassica carinata HOM05D000110 ORTHO05D000024 7.3e-98 360.5 179 100.0
BcaNung04706 Brassica carinata HOM05D000110 ORTHO05D000024 3.5e-68 261.9 159 84.3
BcaC09g51270 Brassica carinata HOM05D000110 ORTHO05D000024 4.6e-52 208.4 159 67.9
C01p14950 Brassica napus HOM05D000110 ORTHO05D000024 4.6e-52 208.4 159 67.9
BolC1t01442H Brassica oleracea HOM05D000110 ORTHO05D000024 4.6e-52 208.4 159 67.9
BraA01t01185Z Brassica rapa HOM05D000110 ORTHO05D000024 4.3e-50 201.8 160 67.5
A01p12390 Brassica napus HOM05D000110 ORTHO05D000024 1.6e-49 199.9 160 66.9
Sp7g19080 Schrenkiella parvula HOM05D000110 ORTHO05D000024 1.6e-44 183.3 158 62.0
BcaC09g51278 Brassica carinata HOM05D000110 ORTHO05D000024 4.6e-44 181.8 156 65.4
BolC1t01437H Brassica oleracea HOM05D000110 ORTHO05D000024 7.9e-44 181.0 156 64.7
BcaNung04708 Brassica carinata HOM05D000110 ORTHO05D000024 5.1e-43 178.3 159 62.3
BraA01t01183Z Brassica rapa HOM05D000110 ORTHO05D000024 4.3e-42 175.3 156 64.1
C01p14900 Brassica napus HOM05D000110 ORTHO05D000024 6.3e-41 171.4 163 60.7
BraA01t01184Z Brassica rapa HOM05D000110 ORTHO05D000024 4.1e-40 168.7 149 63.1
BcaC09g51273 Brassica carinata HOM05D000110 ORTHO05D000024 5.3e-40 168.3 156 60.9
C01p14930 Brassica napus HOM05D000110 ORTHO05D000024 5.3e-40 168.3 156 60.9
BolC1t01440H Brassica oleracea HOM05D000110 ORTHO05D000024 2.0e-39 166.4 156 60.9
BcaNung04709 Brassica carinata HOM05D000110 ORTHO05D000024 2.6e-39 166.0 160 60.0
A01p12380 Brassica napus HOM05D000110 ORTHO05D096758 3.6e-36 155.6 136 64.7
Sp7g19120 Schrenkiella parvula HOM05D000110 ORTHO05D000024 3.1e-32 142.5 163 52.8
Sp7g19110 Schrenkiella parvula HOM05D000110 ORTHO05D000024 4.1e-32 142.1 161 53.4
Thhalv10026815m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.2e-31 140.6 162 50.6
BcaC09g51305 Brassica carinata HOM05D000110 ORTHO05D000024 1.5e-31 140.2 136 59.6
Sp7g19130 Schrenkiella parvula HOM05D000110 ORTHO05D000024 3.9e-27 125.6 163 50.3
BcaB03g11711 Brassica carinata HOM05D000110 ORTHO05D000024 8.8e-27 124.4 120 58.3
Thhalv10002284m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 2.0e-26 123.2 149 52.3
BcaB03g11683 Brassica carinata HOM05D000110 ORTHO05D000024 7.4e-26 121.3 131 54.2
Thhalv10027190m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 9.7e-26 120.9 149 52.3
Thhalv10027080m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.3e-25 120.6 173 46.2
CARHR227590 Cardamine hirsuta HOM05D000110 ORTHO05D000024 1.1e-24 117.5 158 46.8
A08p15320 Brassica napus HOM05D000110 ORTHO05D000024 5.3e-24 115.2 164 45.7
BraA08t33509Z Brassica rapa HOM05D000110 ORTHO05D000024 5.3e-24 115.2 164 45.7
CARHR227620 Cardamine hirsuta HOM05D000110 ORTHO05D000024 5.3e-24 115.2 144 48.6
Thhalv10027321m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 7.0e-24 114.8 149 49.7
BcaC01g00719 Brassica carinata HOM05D000110 ORTHO05D000024 4.5e-23 112.1 159 45.9
BolC3t20636H Brassica oleracea HOM05D000110 ORTHO05D000024 4.5e-23 112.1 159 45.9
AL7G33100 Arabidopsis lyrata HOM05D000110 ORTHO05D000024 6.5e-22 108.2 124 50.0
CARHR227570 Cardamine hirsuta HOM05D000110 ORTHO05D000024 6.5e-22 108.2 157 45.9
C03p83080 Brassica napus HOM05D000110 ORTHO05D000024 4.2e-21 105.5 113 54.9
A08p14990 Brassica napus HOM05D000110 ORTHO05D000024 5.5e-21 105.1 124 51.6
BraA08t33481Z Brassica rapa HOM05D000110 ORTHO05D000024 5.5e-21 105.1 124 51.6
Sp7g19090 Schrenkiella parvula HOM05D000110 ORTHO05D000024 7.2e-21 104.8 137 49.6
AL7G33050 Arabidopsis lyrata HOM05D000110 ORTHO05D000024 4.0e-19 99.0 165 43.6
BraA08t33511Z Brassica rapa HOM05D000110 ORTHO05D000024 5.2e-19 98.6 168 42.3
Thhalv10000493m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 8.8e-19 97.8 126 48.4
C03p83560 Brassica napus HOM05D000110 ORTHO05D000024 1.5e-18 97.1 145 46.2
BcaNung05420 Brassica carinata HOM05D000110 ORTHO05D000024 3.4e-18 95.9 131 44.3
Thhalv10000621m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 3.4e-18 95.9 121 51.2
CARHR227580 Cardamine hirsuta HOM05D000110 ORTHO05D000024 7.5e-18 94.7 124 46.0
BcaNung04704 Brassica carinata HOM05D000110 ORTHO05D000024 1.3e-17 94.0 132 47.7
CARHR221090 Cardamine hirsuta HOM05D000110 ORTHO05D000024 1.7e-17 93.6 141 43.3
BcaC09g51269 Brassica carinata HOM05D000110 ORTHO05D000024 2.2e-17 93.2 130 46.9
C01p14960 Brassica napus HOM05D000110 ORTHO05D000024 2.2e-17 93.2 130 46.9
BcaB03g11701 Brassica carinata HOM05D000110 ORTHO05D000024 4.8e-17 92.0 160 40.6
A08p15350 Brassica napus HOM05D000110 ORTHO05D000024 1.4e-16 90.5 168 39.9
A01p12400 Brassica napus HOM05D000110 ORTHO05D000024 2.4e-16 89.7 132 45.5
Thhalv10027456m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 2.4e-16 89.7 103 46.6
C07p51050 Brassica napus HOM05D000110 ORTHO05D000024 1.6e-15 87.0 131 43.5
BolC7t45605H Brassica oleracea HOM05D000110 ORTHO05D000024 1.6e-15 87.0 131 43.5
BcaC01g00683 Brassica carinata HOM05D000110 ORTHO05D000024 2.7e-15 86.3 102 51.0
BolC1t01443H Brassica oleracea HOM05D000110 ORTHO05D000024 2.7e-15 86.3 124 46.0
BolC3t20590H Brassica oleracea HOM05D000110 ORTHO05D000024 2.7e-15 86.3 102 51.0
CARHR254770 Cardamine hirsuta HOM05D000110 ORTHO05D000024 1.0e-14 84.3 115 44.3
BraA03t14335Z Brassica rapa HOM05D000110 ORTHO05D000024 1.7e-14 83.6 131 42.0
BraA01t01186Z Brassica rapa HOM05D000110 ORTHO05D000024 2.9e-14 82.8 132 43.2
BcaC01g00722 Brassica carinata HOM05D000110 ORTHO05D000024 1.1e-13 80.9 173 37.6
BolC3t20640H Brassica oleracea HOM05D000110 ORTHO05D000024 1.1e-13 80.9 173 37.6
C03p83610 Brassica napus HOM05D000110 ORTHO05D000024 1.5e-13 80.5 163 39.3
A03p52610 Brassica napus HOM05D000110 ORTHO05D000024 9.4e-13 77.8 131 39.7
Carub.0007s2041 Capsella rubella HOM05D000110 ORTHO05D000024 1.2e-12 77.4 85 50.6
BolC1t01412H Brassica oleracea HOM05D000110 ORTHO05D000024 1.4e-11 73.9 75 57.3
Thhalv10000527m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 2.3e-11 73.2 142 39.4
AT4G21050 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 2.0e-10 70.1 105 41.0
Thhalv10000420m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 3.4e-10 69.3 130 42.3
Thhalv10000624m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 5.7e-10 68.6 91 49.5
AT4G21080 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 1.7e-09 67.0 165 37.0
AT4G21040 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 8.3e-09 64.7 103 39.8
Thhalv10000425m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.1e-08 64.3 88 45.5
Thhalv10000492m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.1e-08 64.3 88 45.5
BcaNung05418 Brassica carinata HOM05D000110 ORTHO05D024465 1.8e-08 63.5 81 46.9
Carub.0007s2035 Capsella rubella HOM05D000110 ORTHO05D000024 7.0e-08 61.6 160 33.8
Thhalv10000542m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 9.1e-08 61.2 159 34.0
Carub.0005s0897 Capsella rubella HOM05D000110 ORTHO05D000024 3.5e-07 59.3 160 33.1


User provided reference genes

Program Settings