Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33522 Brassica carinata HOM05D000480 ORTHO05D000313 5.2e-44 180.6 90 100.0
BcaC06g33534 Brassica carinata HOM05D000480 ORTHO05D000313 5.2e-44 180.6 90 100.0
BcaNung04663 Brassica carinata HOM05D000480 ORTHO05D000313 5.2e-44 180.6 90 100.0
BcaNung04661 Brassica carinata HOM05D000480 ORTHO05D000313 5.8e-27 124.0 90 73.3
CARHR223630 Cardamine hirsuta HOM05D000480 ORTHO05D000313 6.4e-26 120.6 88 69.3
BcaC06g33524 Brassica carinata HOM05D000480 ORTHO05D000313 1.1e-22 109.8 81 71.6
C07p48560 Brassica napus HOM05D000480 ORTHO05D000313 2.1e-21 105.5 51 100.0
Thhalv10027198m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.1e-20 103.2 89 60.7
BolC1t02492H Brassica oleracea HOM05D000480 ORTHO05D000313 1.2e-16 89.7 91 52.7
BcaB04g18386 Brassica carinata HOM05D000480 ORTHO05D000313 2.7e-16 88.6 91 51.6
BcaB01g01575 Brassica carinata HOM05D000480 ORTHO05D000313 8.7e-15 83.6 84 56.0
THA.LOC104799245 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 8.7e-15 83.6 90 50.0
BraA09t36340Z Brassica rapa HOM05D000480 ORTHO05D000313 4.3e-14 81.3 94 47.9
BraA09t38388Z Brassica rapa HOM05D000480 ORTHO05D000313 4.3e-14 81.3 84 51.2
BcaC07g41900 Brassica carinata HOM05D000480 ORTHO05D000313 9.6e-14 80.1 89 50.6
BolC8t52491H Brassica oleracea HOM05D000480 ORTHO05D000313 9.6e-14 80.1 89 50.6
A09p65550 Brassica napus HOM05D000480 ORTHO05D000313 1.2e-13 79.7 89 50.6
C08p49550 Brassica napus HOM05D000480 ORTHO05D000313 1.2e-13 79.7 90 51.1
C08p49600 Brassica napus HOM05D000480 ORTHO05D000313 1.2e-13 79.7 90 51.1
BraA09t41900Z Brassica rapa HOM05D000480 ORTHO05D000313 1.6e-13 79.3 89 50.6
Thhalv10029234m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 2.1e-13 79.0 84 53.6
THA.LOC104808351 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 3.6e-13 78.2 86 45.3
CARHR255620 Cardamine hirsuta HOM05D000480 ORTHO05D000313 4.7e-13 77.8 89 50.6
Thhalv10029125m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.1e-12 76.6 89 47.2
THA.LOC104820697 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 1.4e-12 76.3 86 45.3
Carub.0006s2975 Capsella rubella HOM05D000480 ORTHO05D000313 2.4e-12 75.5 88 48.9
A08p20310 Brassica napus HOM05D000480 ORTHO05D000313 1.5e-11 72.8 85 47.1
BcaB05g22330 Brassica carinata HOM05D000480 ORTHO05D000313 2.9e-10 68.6 85 45.9
BcaB01g01576 Brassica carinata HOM05D000480 ORTHO05D000313 6.4e-10 67.4 99 42.4
AT4G11000 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 1.4e-09 66.2 88 44.3
Aa31LG2G13160 Aethionema arabicum HOM05D000480 ORTHO05D000313 1.9e-09 65.9 90 43.3
BcaC03g14172 Brassica carinata HOM05D000480 ORTHO05D000313 1.6e-08 62.8 85 42.4
C02p14460 Brassica napus HOM05D000480 ORTHO05D000313 1.6e-08 62.8 85 42.4
BolC2t07571H Brassica oleracea HOM05D000480 ORTHO05D000313 1.6e-08 62.8 85 42.4
BcaC03g14171 Brassica carinata HOM05D000480 ORTHO05D000313 4.6e-08 61.2 85 41.2
C02p14440 Brassica napus HOM05D000480 ORTHO05D000313 4.6e-08 61.2 85 41.2
BolC2t07568H Brassica oleracea HOM05D000480 ORTHO05D000313 4.6e-08 61.2 85 41.2


User provided reference genes

Program Settings