Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04471 Brassica carinata HOM05D001640 ORTHO05D017443 1.2e-124 449.9 231 100.0
BraA06t23988Z Brassica rapa HOM05D001640 ORTHO05D017443 1.1e-74 283.9 200 76.0
BolC5t29691H Brassica oleracea HOM05D001640 ORTHO05D017443 8.3e-70 267.7 199 74.9
BcaC05g24998 Brassica carinata HOM05D001640 ORTHO05D017443 2.8e-65 252.7 201 72.6
C05p09490 Brassica napus HOM05D001640 ORTHO05D017443 1.6e-57 226.9 199 63.8
BcaC05g24986 Brassica carinata HOM05D006902 ORTHO05D008468 1.5e-47 193.7 152 72.4
AL1G22250 Arabidopsis lyrata HOM05D001640 ORTHO05D001612 5.3e-40 168.7 205 53.2
AT1G11220 Arabidopsis thaliana HOM05D001640 ORTHO05D001612 9.0e-40 167.9 205 53.2
Thhalv10009955m.g Eutrema salsugineum HOM05D001640 ORTHO05D001612 1.0e-35 154.5 207 51.7
Sp1g09890 Schrenkiella parvula HOM05D001640 ORTHO05D017443 2.3e-35 153.3 207 49.3
CARHR011450 Cardamine hirsuta HOM05D001640 ORTHO05D017443 1.3e-30 137.5 204 48.5
AT1G11230 Arabidopsis thaliana HOM05D001640 ORTHO05D017443 2.7e-28 129.8 242 43.4
Carub.0001s1081 Capsella rubella HOM05D001640 ORTHO05D001612 4.5e-23 112.5 212 44.3
Aa31LG2G9360 Aethionema arabicum HOM05D001640 ORTHO05D001612 3.5e-20 102.8 174 46.0
AL2G15050 Arabidopsis lyrata HOM05D001640 ORTHO05D001612 3.1e-16 89.7 163 41.7
AT1G61260 Arabidopsis thaliana HOM05D001640 ORTHO05D001612 5.3e-16 89.0 160 42.5
A09p16810 Brassica napus HOM05D001640 ORTHO05D001612 5.3e-16 89.0 178 41.0
BraA09t37318Z Brassica rapa HOM05D001640 ORTHO05D001612 5.3e-16 89.0 181 40.9
Sp2g03200 Schrenkiella parvula HOM05D001640 ORTHO05D001612 1.5e-15 87.4 163 42.9
Manes.17G040000 Manihot esculenta HOM05D001640 ORTHO05D001612 2.0e-15 87.0 201 37.8
Carub.0001s1080 Capsella rubella HOM05D001640 ORTHO05D001612 4.5e-15 85.9 212 36.3
CARHR051340 Cardamine hirsuta HOM05D001640 ORTHO05D001612 5.8e-15 85.5 206 37.4
Thhalv10023538m.g Eutrema salsugineum HOM05D001640 ORTHO05D001612 5.8e-15 85.5 164 43.3
AL1G22240 Arabidopsis lyrata HOM05D001640 ORTHO05D001612 7.6e-15 85.1 194 37.6
BolC1t03784H Brassica oleracea HOM05D001640 ORTHO05D001612 7.6e-15 85.1 169 37.3
BcaB07g31270 Brassica carinata HOM05D001640 ORTHO05D001612 1.7e-14 84.0 184 40.2
Lj1A1212G53 Lonicera japonica HOM05D001640 ORTHO05D001612 2.9e-14 83.2 152 40.1
C01p38220 Brassica napus HOM05D001640 ORTHO05D001612 3.8e-14 82.8 166 37.3
TWI38G0775 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 3.8e-14 82.8 144 41.0
Duzib235G0541 Durio zibethinus HOM05D001640 ORTHO05D001612 4.9e-14 82.4 199 35.2
AT1G11210 Arabidopsis thaliana HOM05D001640 ORTHO05D001612 8.4e-14 81.6 142 42.3
Thecc.06G197500 Theobroma cacao HOM05D001640 ORTHO05D001612 8.4e-14 81.6 170 38.2
Carub.0002s0389 Capsella rubella HOM05D001640 ORTHO05D001612 1.1e-13 81.3 146 43.2
Gohir.A10G020200 Gossypium hirsutum HOM05D001640 ORTHO05D001612 1.4e-13 80.9 167 37.7
Cpa.g.sc27.111 Carica papaya HOM05D001640 ORTHO05D001612 1.9e-13 80.5 165 39.4
CARHR011440 Cardamine hirsuta HOM05D001640 ORTHO05D001612 3.2e-13 79.7 204 34.8
Gohir.D10G021000 Gossypium hirsutum HOM05D001640 ORTHO05D001612 4.2e-13 79.3 134 41.8
Gorai.011G022100 Gossypium raimondii HOM05D001640 ORTHO05D001612 4.2e-13 79.3 134 41.8
Sp1g09880 Schrenkiella parvula HOM05D001640 ORTHO05D001612 7.1e-13 78.6 203 36.0
Thhalv10008322m.g Eutrema salsugineum HOM05D001640 ORTHO05D001612 1.2e-12 77.8 203 36.0
CiPaw.09G159200 Carya illinoinensis HOM05D001640 ORTHO05D001612 2.1e-12 77.0 136 39.7
Lj2A282T46 Lonicera japonica HOM05D001640 ORTHO05D001612 2.1e-12 77.0 133 39.8
BcaC04g22319 Brassica carinata HOM05D001640 ORTHO05D001612 4.6e-12 75.9 179 39.1
C09p20720 Brassica napus HOM05D001640 ORTHO05D001612 4.6e-12 75.9 179 39.1
BolC9t54969H Brassica oleracea HOM05D001640 ORTHO05D001612 4.6e-12 75.9 179 39.1
Gohir.A05G164700 Gossypium hirsutum HOM05D001640 ORTHO05D001612 6.0e-12 75.5 137 40.1
Prupe.4G035700 Prunus persica HOM05D001640 ORTHO05D001612 1.3e-11 74.3 154 36.4
QL05p081827 Quercus lobata HOM05D001640 ORTHO05D001612 2.3e-11 73.6 190 35.3
THA.LOC104809550 Tarenaya hassleriana HOM05D001640 ORTHO05D001612 2.3e-11 73.6 173 38.2
BcaC05g24985 Brassica carinata HOM05D001640 ORTHO05D001612 3.0e-11 73.2 174 38.5
Gorai.009G172800 Gossypium raimondii HOM05D001640 ORTHO05D001612 3.9e-11 72.8 138 40.6
Manes.16G021700 Manihot esculenta HOM05D001640 ORTHO05D001612 5.1e-11 72.4 136 42.6
Nitab4.5_0008686g0010 Nicotiana tabacum HOM05D001640 ORTHO05D001612 5.1e-11 72.4 163 38.0
A01p30130 Brassica napus HOM05D001640 ORTHO05D001612 8.7e-11 71.6 150 35.3
CiPaw.12G122700 Carya illinoinensis HOM05D001640 ORTHO05D001612 8.7e-11 71.6 201 32.3
Actinidia05587 Actinidia chinensis HOM05D001640 ORTHO05D001612 1.5e-10 70.9 190 34.7
Duzib192G0891 Durio zibethinus HOM05D001640 ORTHO05D001612 1.9e-10 70.5 183 35.0
Haze_06561 Corylus avellana HOM05D001640 ORTHO05D001612 2.5e-10 70.1 146 37.0
Haze_09527 Corylus avellana HOM05D001640 ORTHO05D001612 2.5e-10 70.1 138 38.4
Sc16g0006790 Simmondsia chinensis HOM05D001640 ORTHO05D001612 2.5e-10 70.1 170 37.1
Cfa000364 Carpinus fangiana HOM05D001640 ORTHO05D001612 3.3e-10 69.7 132 39.4
BcaB04g20330 Brassica carinata HOM05D001640 ORTHO05D001612 4.3e-10 69.3 171 37.4
BcaNung04473 Brassica carinata HOM05D001640 ORTHO05D001612 4.3e-10 69.3 151 41.1
Cc02_g12550 Coffea canephora HOM05D001640 ORTHO05D001612 4.3e-10 69.3 143 37.1
PGR042G0663 Punica granatum HOM05D001640 ORTHO05D001612 4.3e-10 69.3 138 37.7
C05p09480 Brassica napus HOM05D001640 ORTHO05D001612 5.7e-10 68.9 151 41.1
BolC5t29690H Brassica oleracea HOM05D001640 ORTHO05D001612 5.7e-10 68.9 151 41.1
Nitab4.5_0008144g0010 Nicotiana tabacum HOM05D001640 ORTHO05D001612 5.7e-10 68.9 175 36.0
Sabra11G0030500 Salix brachista HOM05D001640 ORTHO05D001612 5.7e-10 68.9 196 34.2
vmacro03829 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 5.7e-10 68.9 137 39.4
vmacro23296 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 5.7e-10 68.9 137 39.4
MSTRG.15208 Avicennia marina HOM05D001640 ORTHO05D001612 7.4e-10 68.6 159 36.5
MSTRG.7298 Avicennia marina HOM05D001640 ORTHO05D001612 7.4e-10 68.6 159 34.0
BcaC05g24997 Brassica carinata HOM05D001640 ORTHO05D001612 7.4e-10 68.6 174 37.4
HanXRQChr16g0517791 Helianthus annuus HOM05D001640 ORTHO05D001612 7.4e-10 68.6 178 34.3
PGSC0003DMG400019285 Solanum tuberosum HOM05D001640 ORTHO05D001612 7.4e-10 68.6 143 40.6
PGSC0003DMG400022414 Solanum tuberosum HOM05D001640 ORTHO05D001612 7.4e-10 68.6 148 37.8
A06p07880 Brassica napus HOM05D001640 ORTHO05D001612 9.7e-10 68.2 142 40.8
BraA06t23987Z Brassica rapa HOM05D001640 ORTHO05D001612 9.7e-10 68.2 142 40.8
Peaxi162Scf00588g00078 Petunia axillaris HOM05D001640 ORTHO05D001612 1.3e-09 67.8 148 38.5
CiPaw.11G176400 Carya illinoinensis HOM05D001640 ORTHO05D001612 1.6e-09 67.4 187 33.7
Dinv08340 Davidia involucrata HOM05D001640 ORTHO05D001612 1.6e-09 67.4 137 39.4
Nitab4.5_0003574g0140 Nicotiana tabacum HOM05D001640 ORTHO05D001612 1.6e-09 67.4 147 36.7
Cfa020506 Carpinus fangiana HOM05D001640 ORTHO05D001612 2.2e-09 67.0 140 38.6
ClCG03G005570 Citrullus lanatus HOM05D001640 ORTHO05D001612 3.7e-09 66.2 153 35.9
Solyc07g063560.4 Solanum lycopersicum HOM05D001640 ORTHO05D001612 3.7e-09 66.2 144 40.3
Sopen07g031740 Solanum pennellii HOM05D001640 ORTHO05D001612 4.8e-09 65.9 137 41.6
Ca_01806_v3 Cicer arietinum L. HOM05D001640 ORTHO05D001612 6.3e-09 65.5 154 37.7
MD03G1219300 Malus domestica HOM05D001640 ORTHO05D001612 6.3e-09 65.5 138 37.7
RcHm_v2.0_Chr5g0006611 Rosa chinensis HOM05D001640 ORTHO05D001612 6.3e-09 65.5 142 36.6
Hund21272 Selenicereus undatus HOM05D001640 ORTHO05D001612 6.3e-09 65.5 149 34.2
SGA_v2.0_scaffold73G24316 Striga asiatica HOM05D001640 ORTHO05D001612 6.3e-09 65.5 180 31.7
Ciclev10016038m.g Citrus clementina HOM05D001640 ORTHO05D001612 8.2e-09 65.1 144 37.5
Hma1.2p1_0144F.1_g064810 Hydrangea macrophylla HOM05D001640 ORTHO05D001612 8.2e-09 65.1 144 37.5
VMungo1080G1259 Vigna mungo HOM05D001640 ORTHO05D001612 8.2e-09 65.1 150 38.0
GSVIVG01006712001 Vitis vinifera HOM05D001640 ORTHO05D001612 8.2e-09 65.1 128 35.9
Ah.06g183580 Amaranthus hybridus HOM05D001640 ORTHO05D001612 1.1e-08 64.7 186 33.9
CAN.G162.103 Capsicum annuum HOM05D001640 ORTHO05D001612 1.1e-08 64.7 141 39.7
Lalb_Chr25g0286731 Lupinus albus HOM05D001640 ORTHO05D001612 1.1e-08 64.7 165 32.7
Sopen02g023820 Solanum pennellii HOM05D001640 ORTHO05D001612 1.1e-08 64.7 151 35.8
Rhsim13G0174000 Rhododendron simsii HOM05D001640 ORTHO05D001612 1.4e-08 64.3 136 38.2
TWI38G2165 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 1.4e-08 64.3 151 36.4
FAN16G1307 Fragaria x ananassa HOM05D001640 ORTHO05D001612 1.8e-08 63.9 179 31.8
AUR62029314 Chenopodium quinoa HOM05D001640 ORTHO05D001612 3.1e-08 63.2 197 32.0
Migut.M00878 Erythranthe guttata HOM05D001640 ORTHO05D001612 3.1e-08 63.2 163 37.4
Lj6g0007106 Lotus japonicus HOM05D001640 ORTHO05D001612 3.1e-08 63.2 131 38.2
PGSC0003DMG400005036 Solanum tuberosum HOM05D001640 ORTHO05D001612 3.1e-08 63.2 189 32.3
TAR627G0359 Trochodendron aralioides HOM05D001640 ORTHO05D001612 3.1e-08 63.2 131 38.9
VMungo0540G1672 Vigna mungo HOM05D001640 ORTHO05D001612 3.1e-08 63.2 130 40.8
BraA01t03146Z Brassica rapa HOM05D001640 ORTHO05D001612 4.1e-08 62.8 103 38.8
vmacro11814 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 5.3e-08 62.4 164 36.6
Peaxi162Scf01216g00045 Petunia axillaris HOM05D001640 ORTHO05D001612 6.9e-08 62.0 145 40.7
Potri.011G126900 Populus trichocarpa HOM05D001640 ORTHO05D001612 6.9e-08 62.0 165 33.3
arahy.Tifrunner.gnm1.ann1.CWT1SW Arachis hypogaea HOM05D001640 ORTHO05D001612 9.0e-08 61.6 154 36.4
CANSAT11G1358 Cannabis sativa HOM05D001640 ORTHO05D001612 9.0e-08 61.6 171 33.3
CANSAT35G1846 Cannabis sativa HOM05D001640 ORTHO05D001612 9.0e-08 61.6 150 34.0
Migut.M01202 Erythranthe guttata HOM05D001640 ORTHO05D001612 9.0e-08 61.6 163 36.2
FvH4_3g20920 Fragaria vesca HOM05D001640 ORTHO05D001612 9.0e-08 61.6 180 30.6
FAN21G3887 Fragaria x ananassa HOM05D001640 ORTHO05D001612 9.0e-08 61.6 180 31.1
Cc05_g12660 Coffea canephora HOM05D001640 ORTHO05D001612 1.2e-07 61.2 146 35.6
CsaV3_3G005980 Cucumis sativus L. HOM05D001640 ORTHO05D001612 1.2e-07 61.2 188 31.4
FAN11G1051 Fragaria x ananassa HOM05D001640 ORTHO05D001612 1.2e-07 61.2 180 30.6
FAN25G1770 Fragaria x ananassa HOM05D001640 ORTHO05D001612 1.2e-07 61.2 150 34.0
Potri.004G035700 Populus trichocarpa HOM05D001640 ORTHO05D001612 1.2e-07 61.2 151 35.1
Solyc03g006620.3 Solanum lycopersicum HOM05D001640 ORTHO05D001612 1.2e-07 61.2 168 35.1
Cpa.g.sc80.113 Carica papaya HOM05D001640 ORTHO05D001612 1.5e-07 60.8 149 34.9
Prupe.4G189800 Prunus persica HOM05D001640 ORTHO05D001612 1.5e-07 60.8 167 33.5
TAR626G0635 Trochodendron aralioides HOM05D001640 ORTHO05D001612 1.5e-07 60.8 137 39.4
FvH4_3g04160 Fragaria vesca HOM05D001640 ORTHO05D001612 2.0e-07 60.5 147 34.0
FAN21G3900 Fragaria x ananassa HOM05D001640 ORTHO05D001612 2.0e-07 60.5 146 36.3
MD05G1324300 Malus domestica HOM05D001640 ORTHO05D001612 2.0e-07 60.5 169 34.3
Potri.011G044000 Populus trichocarpa HOM05D001640 ORTHO05D001612 2.0e-07 60.5 142 35.2
Sopen03g002630 Solanum pennellii HOM05D001640 ORTHO05D001612 2.0e-07 60.5 200 31.5
arahy.Tifrunner.gnm1.ann1.C6SH89 Arachis hypogaea HOM05D001640 ORTHO05D001612 2.6e-07 60.1 154 35.7
Potri.001G406600 Populus trichocarpa HOM05D001640 ORTHO05D001612 2.6e-07 60.1 188 31.4
ECA248G2763 Erigeron canadensis HOM05D001640 ORTHO05D001612 3.4e-07 59.7 172 33.7
Glyma.12G219700 Glycine max HOM05D001640 ORTHO05D001612 3.4e-07 59.7 152 37.5
Sabra11G0110500 Salix brachista HOM05D001640 ORTHO05D001612 3.4e-07 59.7 144 34.7
EL10Ac4g08062 Beta vulgaris HOM05D001640 ORTHO05D001612 5.9e-07 58.9 131 38.9
Lj3g0003756 Lotus japonicus HOM05D001640 ORTHO05D001612 5.9e-07 58.9 153 37.3
FAN11G1299 Fragaria x ananassa HOM05D001640 ORTHO05D001612 7.7e-07 58.5 148 34.5
FAN16G3443 Fragaria x ananassa HOM05D001640 ORTHO05D001612 7.7e-07 58.5 149 35.6
Phvul.005G086300 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 7.7e-07 58.5 141 36.9
Ah.04g165430 Amaranthus hybridus HOM05D001640 ORTHO05D001612 1.0e-06 58.2 195 31.8
Glyma.13G281600 Glycine max HOM05D001640 ORTHO05D001612 1.0e-06 58.2 149 36.2
SGA_v2.0_scaffold7G03962 Striga asiatica HOM05D001640 ORTHO05D001612 1.0e-06 58.2 127 37.0
Medtr2g080980 Medicago truncatula HOM05D001640 ORTHO05D001612 1.3e-06 57.8 153 35.9
SalBow8G5059 Salvia bowleyana HOM05D001640 ORTHO05D001612 1.3e-06 57.8 129 34.9
ClCG10G006530 Citrullus lanatus HOM05D001640 ORTHO05D001612 1.7e-06 57.4 138 32.6
Nn1g06744 Nelumbo nucifera HOM05D001640 ORTHO05D001612 1.7e-06 57.4 166 34.9
PGR083G2642 Punica granatum HOM05D001640 ORTHO05D001612 1.7e-06 57.4 146 37.7
Sed0018118 Sechium edule HOM05D001640 ORTHO05D001612 1.7e-06 57.4 128 35.9
MELO3C016552.2 Cucumis melo HOM05D001640 ORTHO05D001612 2.2e-06 57.0 188 28.7
Lsat_1_v5_gn_4_57221 Lactuca sativa HOM05D001640 ORTHO05D001612 2.2e-06 57.0 151 35.8
CSS0030521 Camellia sinensis var. sinensis HOM05D001640 ORTHO05D001612 2.9e-06 56.6 147 36.7
DCAR_008703 Daucus carota HOM05D001640 ORTHO05D001612 2.9e-06 56.6 151 32.5
Phvul.006G191200 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 2.9e-06 56.6 132 39.4
QL08p018071 Quercus lobata HOM05D001640 ORTHO05D001612 2.9e-06 56.6 146 37.7
Carub.0008s1465 Capsella rubella HOM05D001640 ORTHO05D001612 3.8e-06 56.2 131 35.1
Manes.03G116400 Manihot esculenta HOM05D001640 ORTHO05D001612 3.8e-06 56.2 191 31.9
Manes.15G083300 Manihot esculenta HOM05D001640 ORTHO05D001612 3.8e-06 56.2 145 37.2
Ciclev10008953m.g Citrus clementina HOM05D001640 ORTHO05D001612 5.0e-06 55.8 148 33.8
AUR62015603 Chenopodium quinoa HOM05D001640 ORTHO05D001612 6.5e-06 55.5 190 31.6
HPP92_014067 Vanilla planifolia HOM05D001640 ORTHO05D001612 6.5e-06 55.5 135 34.8
ATR0693G217 Amborella trichopoda HOM05D001640 ORTHO05D001612 8.5e-06 55.1 154 33.8
TWI39G0097 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 8.5e-06 55.1 144 34.7


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