Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 8.0e-149 530.4 268 100.0
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 1.6e-136 489.6 256 95.3
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 1.6e-136 489.6 256 94.5
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 3.5e-136 488.4 256 94.9
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 1.3e-135 486.5 256 93.8
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 2.3e-135 485.7 256 94.5
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 2.9e-135 485.3 256 93.8
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 2.3e-132 475.7 281 86.1
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 7.5e-131 470.7 258 92.2
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 9.8e-131 470.3 258 91.9
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 1.1e-126 456.8 257 89.1
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 5.0e-119 431.4 258 83.7
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 8.9e-108 394.0 259 76.4
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 1.5e-86 323.6 259 61.8
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 2.1e-85 319.7 262 60.7
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 6.2e-85 318.2 262 59.9
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 3.1e-84 315.8 262 59.9
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 4.0e-84 315.5 259 58.7
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 6.9e-84 314.7 262 61.1
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 6.9e-84 314.7 262 61.1
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 1.2e-83 313.9 262 60.3
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 1.5e-83 313.5 262 60.7
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 2.0e-83 313.2 260 59.2
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 3.4e-83 312.4 262 60.7
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 1.3e-82 310.5 262 58.8
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.7e-82 310.1 262 57.6
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.9e-81 306.6 262 56.9
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 1.9e-81 306.6 262 58.8
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 2.4e-81 306.2 262 57.6
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 4.2e-81 305.4 259 58.3
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 7.1e-81 304.7 259 59.8
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 1.2e-80 303.9 262 56.9
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 1.2e-80 303.9 254 59.1
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 1.2e-80 303.9 261 56.7
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 2.7e-80 302.8 263 58.6
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 2.7e-80 302.8 262 58.4
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 5.1e-79 298.5 262 56.1
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 8.7e-79 297.7 259 55.6
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 8.7e-79 297.7 268 55.6
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 8.7e-79 297.7 268 55.2
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 1.1e-78 297.4 259 56.0
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.1e-78 297.4 259 56.0
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 1.9e-78 296.6 261 57.5
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 1.9e-78 296.6 262 58.0
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 3.3e-78 295.8 269 56.9
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 5.6e-78 295.0 262 56.1
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 5.6e-78 295.0 259 54.4
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 5.6e-78 295.0 262 55.7
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.6e-77 293.5 259 55.2
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 1.6e-77 293.5 259 56.8
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 2.1e-77 293.1 262 56.5
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 4.8e-77 292.0 259 55.2
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 1.1e-76 290.8 259 54.1
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 1.1e-76 290.8 262 55.7
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 1.4e-76 290.4 262 55.0
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 1.4e-76 290.4 263 54.4
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 1.4e-76 290.4 277 55.2
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 1.4e-76 290.4 259 56.0
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 2.4e-76 289.7 258 55.4
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 3.1e-76 289.3 308 49.0
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 6.9e-76 288.1 277 55.2
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 2.0e-75 286.6 265 56.2
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 2.6e-75 286.2 262 56.9
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 3.4e-75 285.8 259 55.2
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 5.8e-75 285.0 258 54.3
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 5.8e-75 285.0 262 55.7
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 5.8e-75 285.0 262 53.1
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 7.6e-75 284.6 261 56.3
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 4.9e-74 282.0 260 53.5
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 1.9e-73 280.0 262 54.2
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 7.1e-73 278.1 260 54.2
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 7.1e-73 278.1 260 54.2
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 1.2e-72 277.3 259 54.1
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 2.7e-72 276.2 259 54.8
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 3.5e-72 275.8 261 52.5
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 2.3e-71 273.1 257 52.1
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 1.1e-70 270.8 265 50.9
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 3.3e-70 269.2 250 53.6
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 3.3e-70 269.2 259 54.4
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 2.1e-69 266.5 259 49.8
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 4.8e-69 265.4 257 51.8
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 7.6e-67 258.1 239 54.8
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 2.2e-66 256.5 297 47.8
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 2.5e-65 253.1 261 49.0
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 1.0e-63 247.7 234 53.0
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 3.9e-63 245.7 290 47.2
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 3.9e-63 245.7 244 52.0
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 5.1e-63 245.4 234 52.6
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.6e-61 240.4 298 45.6
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 3.7e-61 239.2 238 51.7
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 3.1e-60 236.1 200 57.5
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 1.2e-59 234.2 263 47.9
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 2.0e-59 233.4 180 61.7
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 2.3e-55 219.9 195 53.3
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 1.5e-46 190.7 154 62.3
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 7.4e-46 188.3 179 49.7
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 9.4e-41 171.4 139 61.2
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 3.9e-39 166.0 134 56.7
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 2.8e-37 159.8 239 37.7
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 9.1e-36 154.8 247 39.3
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 3.5e-35 152.9 234 40.2
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.2e-32 144.4 244 37.7
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 8.0e-32 141.7 244 34.0
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.4e-31 141.0 123 56.9
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 2.2e-29 133.7 245 36.7
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.0e-26 124.8 109 57.8
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 6.1e-24 115.5 129 50.4
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.3e-23 113.6 198 33.3
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 4.0e-23 112.8 285 27.7
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.4e-20 103.6 107 48.6
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 9.5e-17 91.7 109 47.7
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 2.2e-13 80.5 107 41.1


User provided reference genes

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