Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04269 Brassica carinata HOM05D008387 ORTHO05D010446 6.9e-70 268.1 251 100.0
C07p40540 Brassica napus HOM05D008387 ORTHO05D010446 1.3e-52 210.7 131 86.3
BolC7t44591H Brassica oleracea HOM05D008387 ORTHO05D010446 5.0e-52 208.8 131 85.5
A06p37680 Brassica napus HOM05D008387 ORTHO05D010446 5.5e-51 205.3 131 84.0
BraA06t26688Z Brassica rapa HOM05D008387 ORTHO05D010446 7.9e-50 201.4 131 82.4
Sp2g20470 Schrenkiella parvula HOM05D008387 ORTHO05D010446 4.5e-37 159.1 131 65.6
C09p05610 Brassica napus HOM05D008387 ORTHO05D010446 2.0e-32 143.7 131 58.0
BolC9t53489H Brassica oleracea HOM05D008387 ORTHO05D010446 2.0e-32 143.7 131 58.0
Thhalv10003597m.g Eutrema salsugineum HOM05D008387 ORTHO05D010446 2.6e-32 143.3 119 67.2
BolC9t53490H Brassica oleracea HOM05D008387 ORTHO05D010446 4.4e-32 142.5 131 57.3
AT5G27220 Arabidopsis thaliana HOM05D008387 ORTHO05D010446 7.0e-22 108.6 101 59.4
C09p05620 Brassica napus HOM05D008387 ORTHO05D010446 2.3e-20 103.6 131 45.0
BcaB04g19656 Brassica carinata HOM05D008387 ORTHO05D010446 1.5e-19 100.9 131 45.0
Carub.0006s2529 Capsella rubella HOM05D008387 ORTHO05D010446 1.5e-19 100.9 119 46.2
Sp2g20500 Schrenkiella parvula HOM05D000160 ORTHO05D012263 1.2e-16 91.3 81 58.0
Aa31LG11G8960 Aethionema arabicum HOM05D008387 ORTHO05D010446 8.3e-15 85.1 131 40.5
A09p05180 Brassica napus HOM05D008387 ORTHO05D010446 2.4e-14 83.6 131 38.9
BraA09t36157Z Brassica rapa HOM05D008387 ORTHO05D010446 4.1e-14 82.8 131 38.9
BcaC03g17778 Brassica carinata HOM05D000160 ORTHO05D012263 7.0e-14 82.0 118 44.1
C02p57960 Brassica napus HOM05D000160 ORTHO05D012263 7.0e-14 82.0 118 44.1
BolC2t11863H Brassica oleracea HOM05D000160 ORTHO05D012263 7.0e-14 82.0 118 44.1
BcaC04g23695 Brassica carinata HOM05D008387 ORTHO05D010446 1.6e-13 80.9 131 37.4
BcaC03g17775 Brassica carinata HOM05D000160 ORTHO05D012263 2.0e-13 80.5 132 37.9
C02p57910 Brassica napus HOM05D000160 ORTHO05D012263 2.0e-13 80.5 132 37.9
BolC2t11859H Brassica oleracea HOM05D000160 ORTHO05D012263 2.0e-13 80.5 132 37.9
BcaB07g34191 Brassica carinata HOM05D000160 ORTHO05D012263 1.7e-12 77.4 119 40.3
AL6G39870 Arabidopsis lyrata HOM05D008387 ORTHO05D010446 1.2e-10 71.2 68 52.9
Aa31LG11G8970 Aethionema arabicum HOM05D008387 ORTHO05D010446 2.1e-10 70.5 131 37.4
C09p05600 Brassica napus HOM05D008387 ORTHO05D010446 2.1e-10 70.5 124 39.5
A09p05190 Brassica napus HOM05D008387 ORTHO05D010446 2.8e-10 70.1 131 34.4
CARHR185830 Cardamine hirsuta HOM05D008387 ORTHO05D010446 4.7e-10 69.3 76 46.1
A02p38540 Brassica napus HOM05D000160 ORTHO05D012263 8.0e-10 68.6 120 41.7
A02p38530 Brassica napus HOM05D000160 ORTHO05D012263 1.0e-09 68.2 132 34.8
BraA02t08831Z Brassica rapa HOM05D000160 ORTHO05D012263 1.0e-09 68.2 132 34.8
BolC9t53488H Brassica oleracea HOM05D008387 ORTHO05D010446 1.8e-09 67.4 85 54.1
FAN14G5334 Fragaria x ananassa HOM05D012224 ORTHO05D017959 4.9e-07 59.3 129 30.2
Duzib177G0767 Durio zibethinus HOM05D000439 ORTHO05D002302 1.1e-06 58.2 73 34.2
BcaB01g01853 Brassica carinata HOM05D008387 ORTHO05D010446 3.2e-06 56.6 131 33.6
BcaC04g23553 Brassica carinata HOM05D008387 ORTHO05D010446 3.2e-06 56.6 124 33.9
FAN05G4710 Fragaria x ananassa HOM05D012224 ORTHO05D017959 3.2e-06 56.6 129 29.5
FAN05G5407 Fragaria x ananassa HOM05D012224 ORTHO05D017959 3.2e-06 56.6 129 28.7
RcHm_v2.0_Chr3g0453001 Rosa chinensis HOM05D000439 ORTHO05D002302 3.2e-06 56.6 113 29.2
FvH4_6g04251 Fragaria vesca HOM05D012224 ORTHO05D017959 7.0e-06 55.5 114 28.1


User provided reference genes

Program Settings