Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 3.3e-169 598.2 285 100.0
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 1.8e-162 575.9 286 97.6
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 5.1e-162 574.3 286 96.9
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 5.1e-162 574.3 286 96.9
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 8.7e-162 573.5 286 96.9
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 1.3e-160 569.7 285 94.4
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.3e-160 569.7 285 94.4
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 1.3e-160 569.7 285 94.0
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.6e-160 569.3 285 94.7
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 3.7e-160 568.2 285 94.0
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 4.8e-160 567.8 285 94.0
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 4.8e-160 567.8 285 94.0
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 8.2e-160 567.0 285 94.4
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 1.1e-159 566.6 285 94.0
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 1.1e-159 566.6 285 94.4
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 1.3e-157 559.7 285 93.0
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 4.6e-155 551.2 286 90.6
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 1.8e-154 549.3 285 90.5
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.1e-143 513.5 285 83.5
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.8e-143 512.7 285 83.2
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.4e-143 512.3 285 83.9
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 2.4e-143 512.3 285 83.9
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 3.1e-143 511.9 285 83.2
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 4.1e-143 511.5 285 83.5
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 6.9e-143 510.8 285 82.8
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 2.0e-142 509.2 285 82.8
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 4.5e-142 508.1 284 83.5
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 7.7e-142 507.3 285 82.8
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 7.7e-142 507.3 284 83.1
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 1.3e-141 506.5 280 82.5
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 3.8e-141 505.0 285 83.2
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 5.0e-141 504.6 284 82.0
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 8.5e-141 503.8 278 84.5
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 8.5e-141 503.8 284 81.3
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.5e-140 502.3 285 82.5
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 2.5e-140 502.3 285 81.8
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.2e-140 501.9 285 81.4
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.2e-140 501.9 285 81.4
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 3.2e-140 501.9 280 83.6
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 3.2e-140 501.9 285 81.4
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 3.2e-140 501.9 285 81.4
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 5.5e-140 501.1 285 81.8
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 5.5e-140 501.1 285 81.8
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 5.5e-140 501.1 285 82.1
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 9.4e-140 500.4 285 81.4
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 2.1e-139 499.2 288 81.9
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 2.7e-139 498.8 285 81.1
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 8.0e-139 497.3 284 81.7
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 1.8e-138 496.1 280 81.1
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 1.8e-138 496.1 284 82.4
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 1.8e-138 496.1 279 82.1
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 2.3e-138 495.7 285 79.6
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 3.0e-138 495.4 285 81.1
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 3.0e-138 495.4 285 80.7
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 3.9e-138 495.0 284 80.6
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 5.2e-138 494.6 285 80.4
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 8.8e-138 493.8 285 80.4
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 8.8e-138 493.8 284 81.7
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 8.8e-138 493.8 284 81.7
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 8.8e-138 493.8 284 80.6
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 8.8e-138 493.8 284 79.9
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 1.1e-137 493.4 280 81.8
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.1e-137 493.4 283 82.0
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 2.0e-137 492.7 285 80.7
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 2.0e-137 492.7 285 80.4
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 2.0e-137 492.7 286 80.8
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.6e-137 492.3 284 80.3
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 3.3e-137 491.9 279 79.9
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 3.3e-137 491.9 270 83.7
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 5.7e-137 491.1 284 80.3
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 7.4e-137 490.7 279 80.6
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 7.4e-137 490.7 278 80.9
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.4e-137 490.7 286 80.1
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 7.4e-137 490.7 283 79.9
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 2.2e-136 489.2 283 81.3
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 2.2e-136 489.2 279 80.6
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 2.2e-136 489.2 285 79.6
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 2.8e-136 488.8 282 80.1
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 3.7e-136 488.4 283 81.3
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 1.4e-135 486.5 289 79.9
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.4e-135 486.5 273 81.0
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.8e-135 486.1 280 78.9
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 5.3e-135 484.6 284 78.5
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 5.3e-135 484.6 279 80.3
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 7.0e-135 484.2 279 79.9
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 7.0e-135 484.2 287 79.8
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 9.1e-135 483.8 280 80.4
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.6e-134 483.0 290 78.3
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.6e-134 483.0 302 76.5
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.6e-134 483.0 285 79.6
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.0e-133 480.3 282 79.1
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 1.3e-133 479.9 326 70.9
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.3e-133 479.9 280 78.9
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 5.0e-133 478.0 297 77.4
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 1.1e-132 476.9 280 79.3
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 1.1e-132 476.9 277 79.1
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 2.5e-132 475.7 285 76.8
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 9.4e-132 473.8 278 80.6
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 1.3e-128 463.4 277 76.9
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.3e-128 463.4 282 78.0
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 1.3e-128 463.4 279 76.0
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.1e-127 460.3 285 76.5
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 1.4e-127 459.9 281 74.7
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 3.1e-127 458.8 285 75.8
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 9.1e-127 457.2 284 73.9
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 3.8e-125 451.8 279 76.0
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 5.0e-125 451.4 276 75.4
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 8.0e-123 444.1 247 84.2
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 3.0e-122 442.2 236 86.9
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 1.7e-117 426.4 284 70.4
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 6.5e-117 424.5 280 69.3
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 8.6e-117 424.1 287 72.1
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 3.6e-115 418.7 275 72.4
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 1.8e-114 416.4 233 79.8
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 9.2e-111 404.1 280 66.8
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 3.8e-109 398.7 284 65.8
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 2.1e-107 392.9 281 66.2
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 6.1e-107 391.3 225 81.8
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 9.8e-105 384.0 223 79.8
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 3.6e-99 365.5 196 87.2
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.5e-92 343.6 283 57.2
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.3e-88 330.5 292 57.2
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 5.6e-84 315.1 273 58.6
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 2.7e-78 296.2 171 81.3
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 2.5e-76 289.7 169 79.9
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 2.0e-73 280.0 310 45.5
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 6.2e-67 258.5 280 46.8
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 3.2e-63 246.1 231 55.0
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 5.4e-63 245.4 280 48.2
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 5.1e-61 238.8 278 46.8
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 2.9e-48 196.4 114 77.2
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 1.1e-42 177.9 103 75.7
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 1.0e-24 118.2 78 73.1
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 1.8e-18 97.4 67 65.7
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 6.8e-13 79.0 52 71.2
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 8.8e-13 78.6 56 58.9


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