Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 2.0e-91 339.0 158 100.0
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 5.7e-86 320.9 158 93.7
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 5.7e-86 320.9 158 93.7
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 2.1e-85 318.9 158 93.0
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 8.2e-85 317.0 158 91.8
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 4.6e-80 301.2 158 86.7
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 1.3e-79 299.7 158 84.2
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.1e-76 290.0 163 84.7
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 5.0e-74 281.2 158 82.3
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 6.5e-74 280.8 161 80.1
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 7.2e-73 277.3 144 84.7
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 2.7e-72 275.4 158 80.4
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 3.6e-72 275.0 161 78.9
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 2.3e-71 272.3 158 78.5
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 8.8e-71 270.4 158 77.2
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 8.8e-71 270.4 158 77.2
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 8.8e-71 270.4 158 77.2
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 2.0e-70 269.2 158 77.8
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 3.3e-70 268.5 160 76.9
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 5.3e-60 234.6 155 69.7
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 6.3e-53 211.1 115 83.5
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 5.9e-51 204.5 144 66.7
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 1.3e-50 203.4 116 81.9
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.1e-49 200.3 163 59.5
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 7.0e-36 154.5 147 51.7
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 8.3e-29 131.0 159 44.0
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 7.8e-27 124.4 79 69.6
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 1.0e-26 124.0 149 40.9
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 1.0e-26 124.0 149 40.9
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 1.7e-26 123.2 149 39.6
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 4.3e-25 118.6 149 38.9
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 7.3e-25 117.9 149 38.9
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 3.6e-24 115.5 150 38.7
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 1.0e-23 114.0 150 41.3
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.3e-23 112.8 145 44.8
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 3.4e-22 109.0 149 38.3
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 4.4e-22 108.6 150 39.3
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 5.8e-22 108.2 150 38.7
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 7.5e-22 107.8 150 40.7
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 7.5e-22 107.8 150 38.7
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 1.3e-21 107.1 150 38.7
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 1.7e-21 106.7 150 38.0
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.2e-21 106.3 148 38.5
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 2.9e-21 105.9 139 39.6
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 3.7e-21 105.5 150 36.0
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 6.4e-21 104.8 150 38.7
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 3.4e-14 82.4 107 39.3
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 1.7e-13 80.1 126 35.7
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 6.4e-13 78.2 125 34.4
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 1.4e-12 77.0 125 32.0
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 1.9e-12 76.6 125 32.0
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 2.4e-12 76.3 125 32.0
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 2.4e-12 76.3 125 32.0
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 2.4e-12 76.3 126 34.1
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 1.2e-11 73.9 125 32.8
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 2.1e-11 73.2 120 31.7
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 3.5e-11 72.4 124 30.6
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 8.6e-10 67.8 119 30.3


User provided reference genes

Program Settings