Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03886 Brassica carinata HOM05D008867 ORTHO05D011103 1.2e-97 360.5 292 100.0
A06p48650 Brassica napus HOM05D008867 ORTHO05D011103 7.0e-74 281.6 292 70.2
BcaNung02351 Brassica carinata HOM05D008867 ORTHO05D011103 3.5e-73 279.3 292 75.7
C07p63320 Brassica napus HOM05D008867 ORTHO05D011103 3.5e-73 279.3 292 75.7
BolC7t46743H Brassica oleracea HOM05D008867 ORTHO05D011103 1.3e-72 277.3 292 76.4
BraA06t27732Z Brassica rapa HOM05D008867 ORTHO05D011103 2.8e-62 243.0 307 57.3
Sp1g18340 Schrenkiella parvula HOM05D000394 ORTHO05D013643 2.6e-60 236.5 291 70.8
BraA08t34327Z Brassica rapa HOM05D008867 ORTHO05D011103 1.3e-59 234.2 292 54.5
C03p77690 Brassica napus HOM05D008867 ORTHO05D011103 2.6e-52 209.9 292 59.9
BolC3t20026H Brassica oleracea HOM05D008867 ORTHO05D011103 2.6e-52 209.9 292 59.9
Carub.0007s0107 Capsella rubella HOM05D008867 ORTHO05D011103 3.8e-51 206.1 293 60.8
CARHR247540 Cardamine hirsuta HOM05D008867 ORTHO05D011103 8.4e-51 204.9 292 67.1
A08p23750 Brassica napus HOM05D008867 ORTHO05D011103 2.4e-50 203.4 292 49.7
Thhalv10025841m.g Eutrema salsugineum HOM05D008867 ORTHO05D011103 1.6e-46 190.7 301 54.5
AL7G11130 Arabidopsis lyrata HOM05D008867 ORTHO05D011103 9.9e-44 181.4 293 69.3
AT4G39190 Arabidopsis thaliana HOM05D008867 ORTHO05D011103 9.9e-44 181.4 293 68.9
Thhalv10000417m.g Eutrema salsugineum HOM05D008867 ORTHO05D011103 4.0e-37 159.5 291 46.4
BcaB03g12251 Brassica carinata HOM05D008867 ORTHO05D011103 2.0e-36 157.1 292 61.0
BcaC07g41136 Brassica carinata HOM05D008867 ORTHO05D011103 7.9e-33 145.2 291 43.0
BcaC02g08784 Brassica carinata HOM05D008867 ORTHO05D011103 2.3e-32 143.7 293 39.6
BolC4t26666H Brassica oleracea HOM05D008867 ORTHO05D011103 2.3e-32 143.7 293 39.6
CARHR112500 Cardamine hirsuta HOM05D008867 ORTHO05D011103 3.9e-32 142.9 292 55.1
A04p16220 Brassica napus HOM05D008867 ORTHO05D011103 6.7e-32 142.1 292 39.0
BraA04t17261Z Brassica rapa HOM05D008867 ORTHO05D011103 1.9e-31 140.6 292 38.7
C08p41390 Brassica napus HOM05D008867 ORTHO05D011103 4.3e-31 139.4 299 39.1
AT2G21560 Arabidopsis thaliana HOM05D008867 ORTHO05D011103 1.3e-30 137.9 291 48.8
AL4G10750 Arabidopsis lyrata HOM05D008867 ORTHO05D011103 2.8e-30 136.7 291 53.6
C04p50690 Brassica napus HOM05D008867 ORTHO05D011103 3.7e-30 136.3 292 40.8
BcaC07g41137 Brassica carinata HOM05D008867 ORTHO05D011103 2.0e-28 130.6 298 37.6
BolC8t51700H Brassica oleracea HOM05D008867 ORTHO05D011103 2.0e-28 130.6 298 37.6
Carub.0004s0060 Capsella rubella HOM05D008867 ORTHO05D011103 1.3e-27 127.9 292 42.8
BraA09t41200Z Brassica rapa HOM05D008867 ORTHO05D011103 3.8e-27 126.3 291 42.3
A09p58120 Brassica napus HOM05D008867 ORTHO05D011103 4.9e-27 125.9 291 42.3
BcaB06g27769 Brassica carinata HOM05D008867 ORTHO05D011103 3.5e-25 119.8 304 37.2
Sp4g00720 Schrenkiella parvula HOM05D008867 ORTHO05D011103 2.3e-24 117.1 112 60.7
THA.LOC104807743 Tarenaya hassleriana HOM05D008867 ORTHO05D011103 8.2e-22 108.6 307 44.3
Aa31LG7G14970 Aethionema arabicum HOM05D008867 ORTHO05D011103 3.1e-21 106.7 292 54.5
Aa31LG6G16070 Aethionema arabicum HOM05D008867 ORTHO05D011103 2.1e-17 94.0 285 55.8
THA.LOC104804540 Tarenaya hassleriana HOM05D008867 ORTHO05D011103 1.3e-14 84.7 120 52.5
THA.LOC104824815 Tarenaya hassleriana HOM05D008867 ORTHO05D001632 4.1e-13 79.7 315 33.0
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 7.4e-07 58.9 128 37.5


User provided reference genes

Program Settings