Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03852 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-143 510.4 247 100.0
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 7.3e-64 248.1 324 49.7
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-58 228.4 119 90.8
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-58 228.0 119 91.6
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-56 223.4 119 90.8
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-53 211.5 119 83.2
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-49 200.7 238 50.4
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 8.6e-49 198.0 238 48.7
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-48 197.6 202 53.5
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-48 194.5 219 51.1
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-47 192.2 119 81.5
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 1.1e-46 191.0 218 50.0
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-46 188.0 241 46.9
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-45 187.6 218 50.0
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-44 181.8 228 47.4
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-43 178.3 216 50.5
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-43 178.3 218 49.5
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.2e-42 177.6 128 67.2
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 1.2e-42 177.6 128 67.2
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-42 177.2 218 48.2
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-42 174.9 222 47.7
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-42 174.9 221 48.9
BcaC03g14601 Brassica carinata HOM05D000496 ORTHO05D027466 1.3e-41 174.1 119 66.4
BolC2t08174H Brassica oleracea HOM05D000496 ORTHO05D027466 1.3e-41 174.1 119 66.4
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-41 172.9 218 47.7
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-41 171.8 218 46.3
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-40 170.6 240 42.9
BolC7t44304H Brassica oleracea HOM05D000496 ORTHO05D027466 1.5e-40 170.6 120 69.2
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-39 166.0 207 46.4
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-38 164.5 218 45.9
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-38 161.4 218 45.9
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 9.0e-38 161.4 129 67.4
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 2.0e-37 160.2 122 63.9
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 2.0e-37 160.2 122 63.9
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-33 147.5 197 44.7
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 2.3e-33 146.7 194 45.4
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-33 145.2 186 47.3
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-31 140.6 216 40.7
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 2.1e-31 140.2 221 41.6
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-30 137.1 216 40.3
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-30 136.0 214 41.6
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-30 134.8 216 39.4
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-29 134.0 189 46.6
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-28 131.0 215 40.0
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-28 130.6 125 54.4
BcaC09g48708 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-28 130.2 99 63.6
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 3.8e-28 129.4 234 38.9
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-28 129.0 221 39.4
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-27 127.5 221 38.9
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-27 127.5 203 40.4
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 1.4e-27 127.5 214 39.7
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-27 126.7 190 42.6
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 2.4e-27 126.7 216 38.9
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-27 126.3 203 41.4
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-26 124.0 209 41.6
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-26 123.2 216 37.0
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-25 120.9 203 40.9
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-25 120.2 208 38.0
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-25 119.8 137 49.6
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-25 119.0 204 39.2
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 6.7e-25 118.6 96 58.3
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-25 118.6 89 61.8
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 8.7e-25 118.2 218 36.7
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-24 117.5 149 46.3
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 1.5e-24 117.5 218 36.7
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-24 116.3 120 50.8
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 5.6e-24 115.5 216 35.6
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 2.8e-23 113.2 113 56.6
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-23 112.1 124 48.4
C09p62330 Brassica napus HOM05D058036 ORTHO05D032289 6.2e-23 112.1 100 58.0
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-22 110.9 120 47.5
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-22 109.8 120 50.0
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-22 108.6 101 54.5
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-22 108.6 166 42.2
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-22 108.6 204 36.8
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-21 107.8 218 35.8
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-21 107.1 217 34.6
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-21 106.7 237 35.4
BcaC06g36695 Brassica carinata HOM05D000627 ORTHO05D000365 2.6e-21 106.7 66 75.8
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-20 104.8 203 37.9
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-20 103.6 213 35.2
BcaC06g34564 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-20 103.2 64 75.0
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-20 102.8 217 36.4
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-20 102.4 120 48.3
BcaC05g28121 Brassica carinata HOM05D000496 ORTHO05D039070 1.2e-18 97.8 142 41.5
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-18 97.4 127 46.5
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-17 94.4 101 51.5
BcaC01g01240 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-17 93.6 76 63.2
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 3.9e-17 92.8 95 50.5
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-16 91.3 153 39.9
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-15 87.0 200 32.5
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-15 85.1 74 59.5
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 1.8e-14 84.0 103 43.7
BcaB04g17732 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-14 83.6 81 53.1
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-14 82.0 194 30.4
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-14 81.6 196 35.2
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 1.5e-13 80.9 150 37.3
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-13 80.1 144 35.4
BcaB08g35386 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-12 77.4 91 46.2
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-12 77.0 221 31.2
BcaC04g21194 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-12 75.9 140 38.6
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.5e-12 75.5 192 33.9
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 1.2e-10 71.2 146 34.9
BolC6t39184H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-10 70.1 125 36.8
Thhalv10003335m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.1e-10 68.9 217 30.4
BcaC01g02149 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-09 68.2 50 68.0
Sp1g16530 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.3e-09 67.8 107 39.3
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 1.8e-09 67.4 213 29.1
BcaC06g35070 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-09 67.0 82 48.8
BcaC07g37066 Brassica carinata HOM05D000496 ORTHO05D039815 3.0e-09 66.6 56 60.7
BcaB07g33944 Brassica carinata HOM05D010392 ORTHO05D000411 5.1e-09 65.9 63 54.0
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 8.7e-09 65.1 173 33.5
Sp1g32360 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-08 63.9 198 29.8
BcaC09g48800 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-08 63.2 56 58.9
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 3.3e-08 63.2 188 31.9
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.3e-08 62.8 198 29.8
BcaC05g28479 Brassica carinata HOM05D023072 ORTHO05D000411 7.4e-08 62.0 59 52.5
BcaC05g28639 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-08 62.0 47 61.7
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 9.7e-08 61.6 131 31.3
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 9.7e-08 61.6 213 28.2
Thhalv10011945m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.7e-08 61.6 230 29.6
BcaC03g17066 Brassica carinata HOM05D000496 ORTHO05D032289 1.3e-07 61.2 56 57.1
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 1.3e-07 61.2 158 30.4
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-07 60.8 192 29.2
C03p82040 Brassica napus HOM05D000496 ORTHO05D000411 1.6e-07 60.8 172 30.8
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 2.2e-07 60.5 160 31.9
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-07 60.5 201 28.9
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.2e-07 60.5 181 32.0
Sp7g08940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.2e-07 60.5 199 30.7
SpUn0001_0770 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.2e-07 60.5 162 31.5
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-07 59.7 64 51.6
BolC3t20481H Brassica oleracea HOM05D000496 ORTHO05D000411 4.8e-07 59.3 170 31.2
Sp3g24940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.8e-07 59.3 201 27.4
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.8e-07 59.3 138 29.7
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-07 58.9 193 32.1
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 6.3e-07 58.9 208 28.8
Thhalv10017779m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.3e-07 58.9 129 32.6
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.3e-07 58.9 120 34.2
BcaC01g02150 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-07 58.5 30 80.0
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.2e-07 58.5 132 29.5
BcaC05g28859 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-06 57.8 47 66.0
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-06 57.4 194 31.4
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.8e-06 57.4 158 28.5
Thhalv10011992m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.4e-06 57.0 192 30.2
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 3.1e-06 56.6 121 34.7
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-06 56.6 209 29.7
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.1e-06 56.6 201 28.4
Sp2g05200 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.1e-06 56.6 93 36.6
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.1e-06 56.2 236 27.1
BcaC01g02090 Brassica carinata HOM05D010266 ORTHO05D000411 5.3e-06 55.8 128 32.0
Thhalv10019512m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.3e-06 55.8 201 28.9
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.9e-06 55.5 183 29.5
Sp1g29320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.9e-06 55.5 132 32.6
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-06 55.1 157 31.2
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 9.0e-06 55.1 142 31.7
Sp2g05660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.0e-06 55.1 168 29.8
Sp6g12660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.0e-06 55.1 156 30.1


User provided reference genes

Program Settings