Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 2.1e-222 775.4 401 100.0
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 3.0e-208 728.4 401 95.0
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 2.4e-205 718.8 401 94.3
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 2.9e-203 711.8 401 94.3
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 3.8e-203 711.4 401 94.0
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 7.1e-202 707.2 401 93.8
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 3.9e-192 674.9 401 88.8
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.5e-191 672.9 404 87.9
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 1.2e-185 653.3 404 84.9
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 6.1e-185 651.0 406 84.7
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 8.2e-182 640.6 404 83.9
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.5e-180 636.3 404 83.7
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 7.9e-169 597.4 406 79.6
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 5.5e-146 521.5 403 69.0
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 8.0e-129 464.5 394 63.2
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 1.4e-125 453.8 394 62.4
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 5.4e-125 451.8 388 64.2
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 9.2e-125 451.1 377 64.2
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 1.2e-124 450.7 402 61.9
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 1.6e-124 450.3 396 61.4
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 7.8e-124 448.0 405 59.0
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 1.0e-123 447.6 401 60.3
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 1.0e-123 447.6 365 63.6
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 1.3e-123 447.2 395 61.3
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 1.3e-123 447.2 394 61.4
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 1.7e-123 446.8 400 61.8
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 1.7e-123 446.8 394 61.9
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 3.0e-123 446.0 394 61.4
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 6.6e-123 444.9 375 64.0
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 8.6e-123 444.5 396 61.1
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 1.1e-122 444.1 363 64.5
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 1.5e-122 443.7 360 63.6
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 9.5e-122 441.0 359 64.6
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 1.2e-121 440.7 361 64.0
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 1.2e-121 440.7 392 60.7
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 1.2e-121 440.7 379 62.3
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 1.6e-121 440.3 365 63.0
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 1.6e-121 440.3 355 62.8
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 2.1e-121 439.9 359 63.8
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 2.8e-121 439.5 388 60.8
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 2.8e-121 439.5 378 62.4
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 1.8e-120 436.8 377 62.9
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 1.8e-120 436.8 367 64.3
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 4.0e-120 435.6 366 62.0
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 5.2e-120 435.3 413 58.8
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 8.9e-120 434.5 391 60.9
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 8.9e-120 434.5 385 61.6
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 8.9e-120 434.5 411 58.6
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 1.2e-119 434.1 419 57.8
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 1.2e-119 434.1 387 59.7
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 1.5e-119 433.7 365 62.5
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 2.0e-119 433.3 423 57.9
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 2.6e-119 433.0 390 60.3
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 5.8e-119 431.8 358 63.7
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 5.8e-119 431.8 356 62.6
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 7.5e-119 431.4 378 61.4
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 7.5e-119 431.4 415 59.0
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 9.8e-119 431.0 400 59.8
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 1.3e-118 430.6 359 61.8
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 1.7e-118 430.3 399 59.9
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 2.2e-118 429.9 388 60.1
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 3.7e-118 429.1 421 57.0
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 1.1e-117 427.6 386 59.8
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 1.4e-117 427.2 387 61.0
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 3.2e-117 426.0 375 62.4
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 3.2e-117 426.0 387 58.9
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 3.2e-117 426.0 387 58.9
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 3.2e-117 426.0 361 62.3
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 4.1e-117 425.6 400 58.2
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 9.2e-117 424.5 391 59.6
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 2.1e-116 423.3 367 62.4
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 2.1e-116 423.3 411 58.2
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 2.7e-116 422.9 366 60.7
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 6.0e-116 421.8 387 59.2
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 7.8e-116 421.4 363 59.2
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 7.8e-116 421.4 400 57.5
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 1.0e-115 421.0 422 55.5
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 1.3e-115 420.6 368 59.8
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.7e-115 420.2 387 58.9
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 3.0e-115 419.5 394 59.1
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.1e-114 417.5 365 60.5
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 4.3e-114 415.6 388 57.0
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 5.6e-114 415.2 370 58.4
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 5.6e-114 415.2 356 61.0
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 9.5e-114 414.5 391 58.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 4.7e-113 412.1 287 72.5
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 6.2e-113 411.8 386 58.5
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 8.1e-113 411.4 287 73.2
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 1.8e-112 410.2 418 55.7
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 1.8e-112 410.2 337 63.8
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 6.8e-112 408.3 403 58.1
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 2.0e-111 406.8 371 59.8
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 4.4e-111 405.6 410 55.4
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 2.2e-110 403.3 356 58.1
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 1.4e-109 400.6 287 70.0
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 4.1e-109 399.1 371 59.6
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 7.1e-109 398.3 390 56.7
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 9.2e-109 397.9 364 59.1
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 1.2e-108 397.5 388 58.8
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 1.2e-108 397.5 403 57.1
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 3.5e-108 396.0 354 59.3
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 4.6e-108 395.6 409 54.5
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 6.0e-108 395.2 386 57.5
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 7.8e-108 394.8 375 56.8
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 1.0e-107 394.4 302 66.9
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 1.7e-107 393.7 370 59.7
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 1.7e-107 393.7 370 59.7
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 1.7e-107 393.7 388 55.7
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 2.3e-107 393.3 371 57.1
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 2.3e-107 393.3 359 57.7
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 6.6e-107 391.7 413 54.0
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 1.5e-106 390.6 371 59.3
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 1.5e-106 390.6 371 59.3
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 3.3e-106 389.4 370 59.2
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 5.6e-106 388.7 367 59.9
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 5.6e-106 388.7 365 57.5
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 9.6e-106 387.9 367 59.7
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 9.6e-106 387.9 355 55.2
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 2.8e-105 386.3 367 59.7
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 2.8e-105 386.3 374 58.6
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 1.4e-104 384.0 357 57.4
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 6.9e-104 381.7 367 58.6
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 1.2e-103 380.9 373 57.9
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 5.8e-103 378.6 364 56.9
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 5.4e-101 372.1 360 57.2
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 4.6e-100 369.0 286 66.8
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 7.8e-100 368.2 370 57.8
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 2.3e-99 366.7 283 64.3
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 3.9e-99 365.9 290 60.0
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 5.6e-98 362.1 369 55.8
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 8.1e-97 358.2 365 52.3
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 5.4e-93 345.5 492 43.3
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 3.6e-89 332.8 416 47.6
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 8.1e-89 331.6 285 62.1
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 7.6e-87 325.1 303 58.4
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 4.2e-85 319.3 251 66.5
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 1.6e-84 317.4 355 50.1
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 5.6e-82 308.9 370 48.1
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 1.9e-66 257.3 199 64.8
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 1.7e-57 227.6 291 40.9
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 2.6e-55 220.3 295 41.4
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 7.2e-53 212.2 171 64.9
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 2.7e-52 210.3 155 67.7
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 5.0e-38 162.9 256 41.4
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 8.8e-27 125.6 246 36.6
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 1.3e-25 121.7 189 40.7
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 1.5e-21 108.2 108 52.8
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 5.6e-21 106.3 174 41.4
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 4.7e-20 103.2 283 28.3
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 3.4e-18 97.1 141 43.3
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 4.6e-15 86.7 69 62.3
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 3.0e-14 84.0 60 68.3
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 4.9e-09 66.6 142 34.5


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