Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 7.4e-72 273.9 148 100.0
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 6.9e-70 267.3 148 98.0
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 6.9e-70 267.3 148 98.0
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 1.1e-67 260.0 148 95.9
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 1.1e-67 260.0 148 95.9
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.5e-64 249.6 148 91.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 6.5e-60 234.2 153 86.9
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.0e-56 222.6 151 84.1
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 9.7e-56 220.3 151 84.8
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 2.2e-55 219.2 152 83.6
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 5.0e-52 208.0 151 82.1
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 1.6e-50 203.0 149 78.5
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.8e-47 191.4 149 72.5
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 7.7e-45 184.1 149 71.1
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.8e-33 146.4 149 60.4
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 4.0e-33 145.2 152 59.9
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.5e-32 143.3 146 58.2
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 3.4e-32 142.1 154 59.1
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 7.5e-32 141.0 148 58.8
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.3e-31 140.2 148 60.1
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.7e-31 139.8 150 60.0
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 2.2e-31 139.4 148 57.4
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 2.2e-31 139.4 148 58.8
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 2.9e-31 139.0 149 56.4
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 3.7e-31 138.7 153 58.8
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 4.9e-31 138.3 148 58.8
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 4.9e-31 138.3 153 58.8
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 6.4e-31 137.9 148 56.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 8.3e-31 137.5 147 61.9
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.1e-30 137.1 148 58.1
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.1e-30 137.1 150 58.0
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.1e-30 137.1 148 58.1
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.4e-30 136.7 147 59.9
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.4e-30 136.7 148 56.8
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 4.1e-30 135.2 149 57.7
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 5.4e-30 134.8 147 57.8
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 5.4e-30 134.8 154 59.7
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 9.2e-30 134.0 148 56.8
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.2e-29 133.7 145 59.3
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.6e-29 133.3 154 57.1
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.7e-29 132.5 152 57.2
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.5e-29 132.1 153 54.9
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 4.6e-29 131.7 153 54.9
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 6.0e-29 131.3 149 59.1
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 7.8e-29 131.0 155 54.2
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 7.8e-29 131.0 153 56.9
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.0e-28 130.6 153 54.2
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 1.7e-28 129.8 148 54.7
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.7e-28 129.8 149 54.4
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 2.3e-28 129.4 149 58.4
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.3e-28 129.4 151 54.3
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 5.0e-28 128.3 147 54.4
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 5.0e-28 128.3 154 55.8
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 5.0e-28 128.3 148 56.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 6.6e-28 127.9 149 54.4
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 8.6e-28 127.5 153 57.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.1e-27 127.1 148 56.1
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.1e-27 127.1 151 53.0
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.1e-27 127.1 148 54.7
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.5e-27 126.7 148 53.4
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.5e-27 126.7 148 53.4
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.5e-27 126.7 152 54.6
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 1.5e-27 126.7 149 59.1
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.9e-27 126.3 153 56.9
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 2.5e-27 125.9 148 52.7
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.5e-27 125.9 150 54.7
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 2.5e-27 125.9 177 48.6
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 4.3e-27 125.2 151 55.6
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 4.3e-27 125.2 108 68.5
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 7.3e-27 124.4 152 53.3
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 9.5e-27 124.0 109 68.8
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 9.5e-27 124.0 148 53.4
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.1e-26 122.9 148 56.1
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 2.8e-26 122.5 108 65.7
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.8e-26 122.5 113 64.6
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 4.7e-26 121.7 153 56.2
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.7e-26 121.7 150 49.3
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 8.0e-26 120.9 112 65.2
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.4e-25 120.2 79 78.5
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 1.8e-25 119.8 139 56.8
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.8e-25 119.8 151 54.3
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 5.2e-25 118.2 77 77.9
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.2e-25 118.2 148 54.1
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 6.8e-25 117.9 147 53.1
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.6e-24 115.9 135 52.6
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 3.4e-24 115.5 84 72.6
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.4e-24 115.2 135 57.0
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.8e-24 114.8 135 51.1
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 9.8e-24 114.0 151 50.3
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.3e-23 113.6 75 74.7
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.3e-23 113.6 154 48.1
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.2e-23 112.8 135 57.0
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 2.9e-23 112.5 108 63.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.1e-22 110.5 108 58.3
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.9e-22 109.8 125 54.4
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.4e-22 109.4 146 45.9
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 3.5e-21 105.5 163 46.0
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.3e-20 103.6 137 50.4
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 3.0e-20 102.4 69 81.2
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 3.3e-19 99.0 77 66.2
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 6.2e-18 94.7 107 50.5
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 9.9e-16 87.4 70 65.7
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.4e-14 83.6 136 42.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 1.2e-13 80.5 120 45.0
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 2.7e-13 79.3 89 48.3
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 3.5e-13 79.0 89 47.2
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 4.6e-13 78.6 79 51.9
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 7.8e-13 77.8 121 43.8
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.0e-12 77.4 55 72.7
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.3e-12 76.3 114 44.7
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.1e-12 75.1 117 47.9
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 3.3e-11 72.4 117 45.3
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 5.6e-11 71.6 83 48.2
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.4e-09 67.0 76 57.9
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 4.2e-06 55.5 49 55.1


User provided reference genes

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