Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03591 Brassica carinata HOM05D000051 ORTHO05D018454 4.1e-78 294.7 149 100.0
A03p61410 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-67 259.2 177 79.7
BolC7t46369H Brassica oleracea HOM05D000051 ORTHO05D000015 7.0e-54 214.2 111 96.4
A03p59830 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-47 192.2 172 63.4
BraA03t15039Z Brassica rapa HOM05D000051 ORTHO05D000015 2.4e-46 189.1 172 62.2
BcaNung03949 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-43 180.3 177 61.0
C07p59220 Brassica napus HOM05D000051 ORTHO05D018454 7.1e-38 161.0 123 72.4
Thhalv10027331m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.7e-29 132.5 173 46.8
Carub.0007s0781 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-26 122.5 168 45.8
BraA08t35372Z Brassica rapa HOM05D000051 ORTHO05D000015 4.0e-25 118.6 111 55.9
BolC8t48903H Brassica oleracea HOM05D000051 ORTHO05D000015 6.9e-25 117.9 113 56.6
C08p12660 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-24 116.7 175 41.7
C08p12680 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-24 116.3 175 41.7
A08p34630 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-24 115.9 175 41.1
AT5G44850 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.9e-23 111.7 131 50.4
AT1G05080 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.2e-22 108.6 178 40.4
BraA08t35374Z Brassica rapa HOM05D000051 ORTHO05D000015 6.0e-21 104.8 112 52.7
AL1G14840 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.0e-20 104.0 182 40.1
C07p59230 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-20 103.6 54 98.1
Carub.0001s0436 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-20 102.8 173 41.0
BcaB05g24481 Brassica carinata HOM05D000051 ORTHO05D000015 3.9e-20 102.1 176 39.2
Thhalv10003402m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.1e-20 101.7 175 40.0
A08p34660 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-19 100.1 134 44.0
BraA08t35378Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-19 100.1 134 44.0
Thhalv10001111m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.3e-19 99.0 119 48.7
Thhalv10009991m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.3e-19 98.6 112 52.7
BcaC06g31631 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-18 96.7 174 38.5
CARHR175950 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.6e-18 95.5 184 39.7
C07p27010 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-18 95.1 174 38.5
BcaC06g34571 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-17 94.0 172 39.0
BolC7t43232H Brassica oleracea HOM05D000051 ORTHO05D000015 5.3e-17 91.7 181 37.0
Thhalv10017690m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.8e-16 88.2 120 44.2
Thhalv10028348m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-15 85.9 115 45.2
Carub.0006s0548 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-15 85.5 111 45.9
Carub.0002s0899 Capsella rubella HOM05D000051 ORTHO05D000015 6.4e-15 84.7 181 36.5
Thhalv10005273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.4e-15 84.7 189 33.9
BcaB03g11993 Brassica carinata HOM05D000051 ORTHO05D018454 2.4e-14 82.8 112 44.6
CARHR178840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.4e-14 82.8 115 45.2
Thhalv10009745m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.2e-14 82.4 122 41.0
AL7G27750 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.2e-14 82.0 114 42.1
BcaB01g03636 Brassica carinata HOM05D000051 ORTHO05D000015 7.1e-14 81.3 84 56.0
BcaC02g07457 Brassica carinata HOM05D000051 ORTHO05D000015 7.1e-14 81.3 113 42.5
C04p66760 Brassica napus HOM05D000051 ORTHO05D000015 7.1e-14 81.3 113 42.5
BraA04t16308Z Brassica rapa HOM05D000051 ORTHO05D000015 1.6e-13 80.1 113 42.5
Thhalv10028299m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.6e-13 80.1 111 40.5
A03p58230 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-13 79.7 165 32.1
AL1G38800 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.7e-13 79.3 95 47.4
AL1G38860 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.7e-13 79.3 108 46.3
BcaC02g09153 Brassica carinata HOM05D000051 ORTHO05D000015 2.7e-13 79.3 113 41.6
BolC4t25471H Brassica oleracea HOM05D000051 ORTHO05D000015 2.7e-13 79.3 113 41.6
CARHR024990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.7e-13 79.3 112 44.6
Thhalv10009950m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.0e-13 78.2 89 48.3
AL3G22250 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.9e-13 77.8 116 45.7
Carub.0320s0001 Capsella rubella HOM05D000051 ORTHO05D000015 7.9e-13 77.8 110 42.7
Sp3g31850 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.0e-12 77.4 109 37.6
Aa31LG9G8860 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.3e-12 77.0 115 38.3
C07p19700 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-12 76.6 127 41.7
BolC7t42486H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-12 76.6 127 41.7
Carub.0008s0420 Capsella rubella HOM05D000051 ORTHO05D000015 3.9e-12 75.5 115 37.4
Aa31LG5G14290 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.1e-12 75.1 116 43.1
C08p12650 Brassica napus HOM05D000051 ORTHO05D000015 5.1e-12 75.1 104 45.2
CARHR158480 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.1e-12 75.1 168 35.1
A09p40240 Brassica napus HOM05D000051 ORTHO05D000015 6.7e-12 74.7 112 42.9
BraA09t39522Z Brassica rapa HOM05D000051 ORTHO05D000015 6.7e-12 74.7 112 42.9
Carub.0001s2407 Capsella rubella HOM05D000051 ORTHO05D000015 8.7e-12 74.3 70 54.3
Carub.0007s3566 Capsella rubella HOM05D000051 ORTHO05D000015 8.7e-12 74.3 113 38.1
Thhalv10029506m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-11 73.9 113 39.8
Aa31LG3G3930 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.5e-11 73.6 113 39.8
Aa31LG3G3950 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.5e-11 73.6 113 39.8
A03p58220 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-11 72.8 165 29.7
A03p58240 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-11 72.8 165 29.7
A03p58250 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-11 72.8 165 29.7
BraA03t14887Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-11 72.8 165 29.7
BraA03t14888Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-11 72.8 165 29.7
C09p14210 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-11 72.4 109 38.5
Carub.0001s2408 Capsella rubella HOM05D000051 ORTHO05D000015 5.6e-11 71.6 110 41.8
Aa31LG5G22000 Aethionema arabicum HOM05D000051 ORTHO05D000015 7.4e-11 71.2 163 34.4
CARHR158440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.4e-11 71.2 116 42.2
Thhalv10011126m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.4e-11 71.2 113 37.2
Sp3g09080 Schrenkiella parvula HOM05D000051 ORTHO05D000015 7.4e-11 71.2 118 39.0
C07p04350 Brassica napus HOM05D000051 ORTHO05D000015 9.6e-11 70.9 94 37.2
Carub.0007s2619 Capsella rubella HOM05D000051 ORTHO05D000015 9.6e-11 70.9 111 40.5
BcaC06g36412 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-10 70.5 94 37.2
Carub.0004s2887 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-10 70.5 109 40.4
CARHR141500 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-10 70.1 110 40.9
BcaC07g39717 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-10 69.7 113 40.7
C08p28890 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-10 69.7 113 40.7
BolC8t50491H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-10 69.7 113 40.7
BraA09t40121Z Brassica rapa HOM05D000051 ORTHO05D000015 2.1e-10 69.7 113 40.7
C04p39010 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-10 68.9 139 34.5
A04p06040 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-10 68.6 138 34.1
AT1G22000 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.1e-10 67.8 112 40.2
Carub.0007s3567 Capsella rubella HOM05D000051 ORTHO05D000015 8.1e-10 67.8 113 38.1
Aa31sc352G40 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.1e-09 67.4 110 41.8
THA.LOC104811717 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.8e-09 66.6 114 39.5
Aa31sc535G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.4e-09 66.2 109 41.3
AT1G26890 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.4e-09 66.2 91 42.9
Thhalv10028298m.g Eutrema salsugineum HOM05D000051 ORTHO05D018454 5.3e-09 65.1 66 50.0
Aa31LG8G16210 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.0e-09 64.3 88 38.6
AT3G49480 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.0e-09 64.3 116 43.1
Aa31LG5G13820 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.0e-08 63.2 113 35.4
AL3G22230 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.0e-08 63.2 115 40.9
Aa31LG7G1450 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.4e-08 62.4 111 34.2
Aa31sc352G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.4e-08 62.4 111 40.5
AL2G12050 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.5e-08 62.0 130 37.7
Aa31LG9G8810 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.8e-08 61.6 72 44.4
Aa31sc947G30 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.8e-08 61.6 111 40.5
BcaC06g35108 Brassica carinata HOM05D000051 ORTHO05D000015 5.8e-08 61.6 128 39.1
BcaC05g29468 Brassica carinata HOM05D000051 ORTHO05D000015 7.6e-08 61.2 126 35.7
BolC5t34431H Brassica oleracea HOM05D000051 ORTHO05D000015 7.6e-08 61.2 126 35.7
CARHR222700 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.6e-08 61.2 116 36.2
BraA05t22638Z Brassica rapa HOM05D000051 ORTHO05D000015 9.9e-08 60.8 120 38.3
BcaC04g21979 Brassica carinata HOM05D000051 ORTHO05D000015 1.7e-07 60.1 111 34.2
A05p38470 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-07 60.1 109 39.4
BcaC05g29466 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-07 59.7 126 35.7
C02p36720 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-07 59.7 93 40.9
C05p57370 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-07 59.7 76 46.1
C05p57720 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-07 59.7 126 35.7
BolC5t34393H Brassica oleracea HOM05D000051 ORTHO05D000015 2.2e-07 59.7 76 46.1
BolC5t34421H Brassica oleracea HOM05D000051 ORTHO05D000015 2.2e-07 59.7 126 35.7
BolC5t34429H Brassica oleracea HOM05D000051 ORTHO05D033618 2.2e-07 59.7 126 35.7
Carub.0003s0998 Capsella rubella HOM05D000051 ORTHO05D000015 2.2e-07 59.7 125 36.8
C05p57630 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-07 59.3 126 35.7
CARHR158470 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.8e-07 58.9 72 45.8
BcaNung04924 Brassica carinata HOM05D000051 ORTHO05D000015 4.9e-07 58.5 126 34.1
BcaC03g15909 Brassica carinata HOM05D000051 ORTHO05D000015 6.4e-07 58.2 93 39.8
A02p22980 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 57.4 70 47.1
Thhalv10029383m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-06 57.4 86 38.4
AL4G25900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.4e-06 57.0 111 35.1
BcaC05g29436 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-06 57.0 75 46.7
BraA09t37599Z Brassica rapa HOM05D000051 ORTHO05D000015 1.9e-06 56.6 65 43.1
Carub.0005s0504 Capsella rubella HOM05D000051 ORTHO05D000015 1.9e-06 56.6 116 32.8
BolC2t09676H Brassica oleracea HOM05D000051 ORTHO05D000015 3.2e-06 55.8 93 38.7
A05p38480 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-06 55.5 119 36.1
AL1G38830 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.1e-06 54.7 66 47.0
AL8G15660 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.1e-06 54.7 114 37.7
A04p06760 Brassica napus HOM05D000051 ORTHO05D000015 9.3e-06 54.3 94 37.2


User provided reference genes

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