Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03329 Brassica carinata HOM05D021872 ORTHO05D021749 1.3e-52 209.5 113 100.0
C02p07520 Brassica napus HOM05D021872 ORTHO05D021749 1.5e-19 99.8 63 87.3
BolC2t06684H Brassica oleracea HOM05D021872 ORTHO05D021749 1.5e-19 99.8 63 87.3
A02p02900 Brassica napus HOM05D021872 ORTHO05D021749 1.2e-18 96.7 63 87.3
BraA02t05263Z Brassica rapa HOM05D021872 ORTHO05D021749 1.2e-18 96.7 63 87.3
Thhalv10013324m.g Eutrema salsugineum HOM05D001233 ORTHO05D001233 1.1e-14 83.6 81 59.3
C03p07970 Brassica napus HOM05D001233 ORTHO05D001233 2.7e-13 79.0 81 56.8
BolC3t13294H Brassica oleracea HOM05D001233 ORTHO05D001233 2.7e-13 79.0 81 56.8
A03p06990 Brassica napus HOM05D001233 ORTHO05D001233 4.6e-13 78.2 81 56.8
BraA03t10020Z Brassica rapa HOM05D001233 ORTHO05D001233 4.6e-13 78.2 81 56.8
BcaB08g36922 Brassica carinata HOM05D001233 ORTHO05D001233 8.6e-12 73.9 80 56.2
BcaB08g36924 Brassica carinata HOM05D001233 ORTHO05D001233 1.1e-11 73.6 80 56.2
C09p61990 Brassica napus HOM05D001233 ORTHO05D001233 1.4e-09 66.6 81 55.6
BcaB01g05078 Brassica carinata HOM05D001233 ORTHO05D001233 3.1e-09 65.5 70 55.7
Carub.0006s1331 Capsella rubella HOM05D001233 ORTHO05D001233 3.1e-09 65.5 95 50.5
CARHR198170 Cardamine hirsuta HOM05D001233 ORTHO05D001233 2.9e-07 58.9 89 48.3
BolC9t59038H Brassica oleracea HOM05D001233 ORTHO05D001233 3.7e-07 58.5 81 51.9
AT5G15140 Arabidopsis thaliana HOM05D001233 ORTHO05D001233 4.9e-07 58.2 60 56.7
A10p23720 Brassica napus HOM05D001233 ORTHO05D001233 1.9e-06 56.2 61 59.0
BraA10t44434Z Brassica rapa HOM05D001233 ORTHO05D001233 1.9e-06 56.2 61 59.0
Sp6g28930 Schrenkiella parvula HOM05D001233 ORTHO05D001233 4.1e-06 55.1 80 48.8


User provided reference genes

Program Settings