Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03324 Brassica carinata HOM05D009607 ORTHO05D009849 2.2e-58 228.8 121 100.0
BraA02t05266Z Brassica rapa HOM05D009607 ORTHO05D009849 1.5e-49 199.5 120 90.0
BcaC03g13422 Brassica carinata HOM05D009607 ORTHO05D009849 1.9e-49 199.1 120 90.8
C02p07580 Brassica napus HOM05D009607 ORTHO05D009849 1.9e-49 199.1 120 90.8
BolC2t06691H Brassica oleracea HOM05D009607 ORTHO05D009849 1.9e-49 199.1 120 90.8
A02p02940 Brassica napus HOM05D009607 ORTHO05D009849 2.5e-49 198.7 120 90.0
Sp6g28880 Schrenkiella parvula HOM05D009607 ORTHO05D009849 2.2e-45 185.7 119 84.0
CARHR198120 Cardamine hirsuta HOM05D009607 ORTHO05D009849 4.7e-40 167.9 117 76.9
BolC3t13298H Brassica oleracea HOM05D009607 ORTHO05D009849 1.2e-38 163.3 119 78.2
AL6G26040 Arabidopsis lyrata HOM05D009607 ORTHO05D009849 4.4e-38 161.4 111 77.5
AT5G15190 Arabidopsis thaliana HOM05D009607 ORTHO05D009849 7.5e-38 160.6 116 73.3
Thhalv10016066m.g Eutrema salsugineum HOM05D009607 ORTHO05D009849 3.1e-36 155.2 121 71.9
BcaB01g05071 Brassica carinata HOM05D009607 ORTHO05D009849 7.0e-36 154.1 118 74.6
BcaB08g36918 Brassica carinata HOM05D009607 ORTHO05D009849 9.2e-36 153.7 122 74.6
BcaC04g18976 Brassica carinata HOM05D009607 ORTHO05D009849 9.2e-36 153.7 122 74.6
BraA03t10024Z Brassica rapa HOM05D009607 ORTHO05D009849 1.6e-35 152.9 110 78.2
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 1.3e-34 149.8 110 77.3
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 2.3e-34 149.1 117 72.6
C09p61950 Brassica napus HOM05D009607 ORTHO05D009849 5.0e-34 147.9 122 71.3
BcaC04g18975 Brassica carinata HOM05D009607 ORTHO05D009849 1.5e-33 146.4 122 70.5
BolC9t59034H Brassica oleracea HOM05D009607 ORTHO05D009849 1.5e-33 146.4 122 70.5
A10p23660 Brassica napus HOM05D009607 ORTHO05D009849 1.9e-33 146.0 122 69.7
BraA10t44430Z Brassica rapa HOM05D009607 ORTHO05D009849 1.9e-33 146.0 122 69.7
THA.LOC104821033 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 3.0e-31 138.7 126 62.7
Carub.0006s1337 Capsella rubella HOM05D009607 ORTHO05D009849 1.4e-28 129.8 126 68.3
THA.LOC104822523 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 1.8e-28 129.4 130 56.9
Aa31LG11G14370 Aethionema arabicum HOM05D009607 ORTHO05D009849 5.0e-26 121.3 121 61.2
BcaB01g05073 Brassica carinata HOM05D009607 ORTHO05D009849 9.8e-14 80.5 62 72.6
BcaB01g05070 Brassica carinata HOM05D001645 ORTHO05D001749 1.5e-09 66.6 79 57.0
Cpa.g.sc14.11 Carica papaya HOM05D008650 ORTHO05D009849 2.3e-07 59.3 132 40.9
Prupe.3G269200 Prunus persica HOM05D008650 ORTHO05D009849 1.5e-06 56.6 97 41.2
Atru.chr8.210 Acer truncatum HOM05D009607 ORTHO05D009849 2.6e-06 55.8 100 38.0
COL.COLO4_04788 Corchorus olitorius HOM05D015048 ORTHO05D009849 4.4e-06 55.1 114 39.5


User provided reference genes

Program Settings