Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.9e-125 452.6 236 100.0
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.3e-123 446.4 237 98.7
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 4.0e-120 434.9 237 93.2
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.6e-119 432.2 237 93.7
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.9e-117 426.0 238 92.0
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.1e-114 416.8 236 89.0
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.3e-102 376.7 236 80.9
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.4e-93 346.7 237 78.5
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 1.4e-93 346.7 236 74.6
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.2e-93 345.1 237 75.5
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 4.5e-79 298.5 243 62.1
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 4.4e-66 255.4 236 53.8
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.5e-58 230.3 160 70.6
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.4e-51 207.2 236 50.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 8.8e-51 204.5 237 46.0
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 8.8e-51 204.5 236 46.2
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.2e-50 204.1 236 47.5
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.2e-50 204.1 236 47.5
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.7e-49 200.3 236 46.6
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 8.3e-49 198.0 239 48.5
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.1e-48 197.6 238 44.5
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 3.1e-48 196.1 236 43.6
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 5.4e-48 195.3 237 43.5
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 7.0e-48 194.9 236 44.1
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 9.1e-48 194.5 237 46.0
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 1.6e-47 193.7 237 44.7
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 1.3e-46 190.7 238 44.5
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 2.2e-46 189.9 240 42.5
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 5.0e-46 188.7 241 43.2
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 3.2e-45 186.0 236 41.5
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 5.5e-45 185.3 239 42.3
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 5.5e-45 185.3 172 50.6
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.6e-44 183.7 240 42.9
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 2.7e-44 183.0 238 43.7
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 4.7e-44 182.2 238 42.9
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 8.0e-44 181.4 232 41.8
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.4e-43 180.6 237 42.6
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.4e-43 180.6 206 47.1
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.3e-43 179.9 237 43.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 5.2e-43 178.7 237 43.0
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 5.7e-42 175.3 237 42.2
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 5.7e-42 175.3 240 39.2
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 7.5e-42 174.9 168 50.0
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 2.8e-41 172.9 237 38.8
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 3.7e-41 172.6 232 38.8
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 8.3e-41 171.4 168 47.6
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 3.1e-40 169.5 241 39.4
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 4.1e-40 169.1 236 41.9
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 5.4e-40 168.7 226 42.5
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.0e-40 168.3 216 43.1
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 9.1e-40 167.9 176 45.5
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.6e-39 167.2 200 43.0
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.7e-39 166.4 182 48.9
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.7e-39 166.4 241 39.0
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 3.5e-39 166.0 216 42.6
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 3.5e-39 166.0 236 39.0
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 3.5e-39 166.0 240 41.2
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 5.9e-39 165.2 239 37.2
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 2.3e-38 163.3 211 42.7
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.9e-38 162.9 241 38.2
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.9e-38 162.9 175 44.0
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 6.6e-38 161.8 242 39.3
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.6e-38 161.4 211 41.2
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.6e-38 161.4 213 41.8
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.6e-38 161.4 241 38.2
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 8.6e-38 161.4 239 41.8
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.1e-37 161.0 171 43.9
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.5e-37 160.6 209 41.1
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.9e-37 160.2 206 42.2
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.5e-37 159.8 203 39.9
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 2.5e-37 159.8 203 40.9
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 3.3e-37 159.5 171 43.9
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 6.1e-36 155.2 191 44.0
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 2.3e-35 153.3 240 41.2
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 5.2e-35 152.1 262 38.2
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.5e-34 150.6 173 41.6
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 2.0e-34 150.2 175 41.7
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.6e-34 149.8 174 41.4
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 5.7e-34 148.7 175 41.1
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 9.8e-34 147.9 175 41.7
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.7e-33 147.1 229 36.7
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 4.1e-32 142.5 176 39.8
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 5.4e-32 142.1 179 39.1
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 3.5e-31 139.4 179 38.5
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.7e-30 137.1 302 31.5
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 2.3e-30 136.7 237 34.6
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 8.6e-30 134.8 170 38.8
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 2.5e-29 133.3 180 36.7
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 9.5e-29 131.3 236 37.3
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.8e-28 129.8 194 38.1
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 4.0e-27 125.9 182 35.7
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 5.2e-27 125.6 189 38.1
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 7.3e-21 105.1 157 37.6
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 6.2e-20 102.1 86 52.3
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.4e-19 100.9 121 38.8
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.2e-18 97.8 121 38.0
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.2e-18 97.8 84 58.3
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 8.6e-14 81.6 94 38.3
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.9e-13 80.5 76 50.0
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.2e-12 77.8 148 33.8
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 1.1e-11 74.7 197 28.4
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.3e-11 73.6 76 51.3
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 4.0e-11 72.8 78 44.9
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.9e-09 65.9 61 54.1
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 6.4e-09 65.5 192 24.5


User provided reference genes

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