Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02959 Brassica carinata HOM05D008734 ORTHO05D010780 3.6e-42 174.5 87 100.0
BcaNung02046 Brassica carinata HOM05D008734 ORTHO05D010780 7.5e-32 140.2 87 81.6
A03p65060 Brassica napus HOM05D008734 ORTHO05D010780 1.7e-31 139.0 87 81.6
BraA03t15565Z Brassica rapa HOM05D008734 ORTHO05D010780 1.7e-31 139.0 87 81.6
C07p62310 Brassica napus HOM05D008734 ORTHO05D010780 4.1e-30 134.4 87 79.3
BolC7t46647H Brassica oleracea HOM05D008734 ORTHO05D010780 4.1e-30 134.4 87 79.3
Carub.0007s0300 Capsella rubella HOM05D008734 ORTHO05D010780 1.1e-27 126.3 87 75.9
Thhalv10027040m.g Eutrema salsugineum HOM05D008734 ORTHO05D010780 2.5e-27 125.2 87 73.6
BraA08t34221Z Brassica rapa HOM05D008734 ORTHO05D010780 4.3e-27 124.4 87 73.6
BcaC01g00413 Brassica carinata HOM05D008734 ORTHO05D010780 3.6e-26 121.3 87 72.4
C03p79450 Brassica napus HOM05D008734 ORTHO05D010780 3.6e-26 121.3 87 72.4
Sp7g34950 Schrenkiella parvula HOM05D008734 ORTHO05D010780 2.3e-25 118.6 87 73.6
AT4G37290 Arabidopsis thaliana HOM05D008734 ORTHO05D010780 8.9e-25 116.7 87 73.6
AL7G13562 Arabidopsis lyrata HOM05D008734 ORTHO05D010780 2.0e-24 115.5 87 71.3
BraA01t00159Z Brassica rapa HOM05D008734 ORTHO05D010780 1.2e-21 106.3 77 75.3
A01p01680 Brassica napus HOM05D008734 ORTHO05D010780 2.1e-21 105.5 77 74.0
BolC1t00177H Brassica oleracea HOM05D008734 ORTHO05D010780 7.8e-21 103.6 76 75.0
BolC3t20197H Brassica oleracea HOM05D008734 ORTHO05D010780 7.8e-21 103.6 75 72.0
BcaNung02535 Brassica carinata HOM05D008734 ORTHO05D010780 2.3e-20 102.1 76 75.0
C01p01840 Brassica napus HOM05D008734 ORTHO05D010780 2.3e-20 102.1 76 75.0
BcaB06g27886 Brassica carinata HOM05D008734 ORTHO05D010780 4.3e-19 97.8 89 67.4
Aa31LG6G14150 Aethionema arabicum HOM05D008734 ORTHO05D010780 1.2e-18 96.3 87 59.8
BcaB01g02980 Brassica carinata HOM05D008734 ORTHO05D010780 1.2e-18 96.3 90 64.4
BcaC02g08559 Brassica carinata HOM05D008734 ORTHO05D010780 1.1e-17 93.2 89 62.9
BolC4t26825H Brassica oleracea HOM05D008734 ORTHO05D010780 1.1e-17 93.2 89 62.9
A04p17740 Brassica napus HOM05D008734 ORTHO05D010780 2.4e-17 92.0 89 64.0
C04p52560 Brassica napus HOM05D008734 ORTHO05D010780 2.4e-17 92.0 89 62.9
BraA04t17391Z Brassica rapa HOM05D008734 ORTHO05D010780 2.4e-17 92.0 89 64.0
BcaB03g12351 Brassica carinata HOM05D008734 ORTHO05D010780 1.2e-16 89.7 87 57.5
THA.LOC104807602 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 1.5e-16 89.4 86 60.5
THA.LOC109116433 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 2.0e-16 89.0 86 59.3
THA.LOC104813832 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 4.4e-16 87.8 86 59.3
CARHR292860 Cardamine hirsuta HOM05D008734 ORTHO05D010780 9.2e-14 80.1 72 70.8
CARHR245680 Cardamine hirsuta HOM05D008734 ORTHO05D010780 2.1e-13 79.0 66 69.7
Thhalv10000531m.g Eutrema salsugineum HOM05D008734 ORTHO05D010780 4.6e-13 77.8 78 62.8
A09p56980 Brassica napus HOM05D008734 ORTHO05D010780 6.0e-13 77.4 68 69.1
BraA09t41090Z Brassica rapa HOM05D008734 ORTHO05D010780 6.0e-13 77.4 68 69.1
BolC8t51568H Brassica oleracea HOM05D008734 ORTHO05D010780 7.8e-13 77.0 72 68.1
BcaC07g40993 Brassica carinata HOM05D008734 ORTHO05D010780 1.3e-12 76.3 68 67.6
AL4G13160 Arabidopsis lyrata HOM05D008734 ORTHO05D010780 3.0e-12 75.1 72 65.3
C08p39940 Brassica napus HOM05D008734 ORTHO05D010780 3.9e-12 74.7 67 67.2
AT2G23270 Arabidopsis thaliana HOM05D008734 ORTHO05D010780 1.5e-11 72.8 78 59.0
Aa31LG7G13710 Aethionema arabicum HOM05D008734 ORTHO05D010780 9.0e-09 63.5 68 58.8
Carub.0004s0248 Capsella rubella HOM05D008734 ORTHO05D010780 1.5e-08 62.8 55 69.1
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 1.3e-07 59.7 78 44.9
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.4e-06 56.2 64 50.0
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 1.4e-06 56.2 64 46.9
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 4.2e-06 54.7 60 51.7
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 4.2e-06 54.7 59 44.1
Prupe.3G151900 Prunus persica HOM05D008343 ORTHO05D009841 7.1e-06 53.9 68 47.1
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 7.1e-06 53.9 66 39.4
TAR376G1156 Trochodendron aralioides HOM05D008343 ORTHO05D009841 7.1e-06 53.9 45 60.0
Cpa.g.sc6.93 Carica papaya HOM05D008343 ORTHO05D009841 9.3e-06 53.5 42 59.5


User provided reference genes

Program Settings