Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02867 Brassica carinata HOM05D007337 ORTHO05D004972 5.1e-78 294.3 141 100.0
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 3.5e-63 245.0 129 93.8
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 3.5e-63 245.0 129 93.8
BolC7t45322H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-62 242.7 129 93.0
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 6.4e-49 197.6 121 85.1
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 6.4e-49 197.6 121 85.1
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 2.6e-21 105.9 102 51.0
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-21 105.5 95 53.7
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-21 105.5 95 53.7
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 7.4e-21 104.4 94 53.2
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 9.7e-21 104.0 107 50.5
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.3e-20 103.6 100 50.0
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 2.2e-20 102.8 88 55.7
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 2.2e-20 102.8 95 51.6
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 2.8e-20 102.4 103 50.5
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 8.2e-20 100.9 95 53.7
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.4e-19 100.1 95 52.6
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 1.4e-19 100.1 105 50.5
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.8e-19 99.8 107 49.5
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.4e-19 99.4 86 61.6
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 5.3e-19 98.2 113 45.1
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.5e-18 96.7 81 59.3
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-18 95.9 109 54.1
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-18 95.5 94 52.1
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 3.4e-18 95.5 94 52.1
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 4.5e-18 95.1 104 49.0
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 5.9e-18 94.7 112 45.5
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 5.9e-18 94.7 94 51.1
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 5.9e-18 94.7 112 45.5
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 7.7e-18 94.4 114 44.7
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.3e-17 93.6 92 54.3
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-17 93.2 94 51.1
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-17 93.2 94 51.1
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.2e-17 92.8 92 52.2
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 3.8e-17 92.0 92 51.1
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 3.8e-17 92.0 92 51.1
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 3.8e-17 92.0 92 51.1
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.0e-17 91.7 96 47.9
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 6.5e-17 91.3 81 55.6
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.5e-16 89.4 96 49.0
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 3.2e-16 89.0 78 56.4
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.2e-16 89.0 83 51.8
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 4.2e-16 88.6 81 54.3
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 2.7e-15 85.9 101 48.5
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.0e-14 82.4 93 49.5
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 3.9e-14 82.0 81 54.3
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 5.2e-14 81.6 61 62.3
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 6.7e-14 81.3 88 47.7
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-13 80.5 65 61.5
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 1.1e-13 80.5 65 61.5
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 1.5e-13 80.1 72 51.4
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-13 79.7 63 57.1
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-13 79.7 107 47.7
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-13 79.7 88 53.4
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 2.0e-13 79.7 107 47.7
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 4.4e-13 78.6 87 44.8
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.7e-13 78.2 99 44.4
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 5.7e-13 78.2 86 47.7
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 5.7e-13 78.2 86 47.7
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 7.4e-13 77.8 72 48.6
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 7.4e-13 77.8 72 48.6
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 9.7e-13 77.4 89 43.8
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 9.7e-13 77.4 62 59.7
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 9.7e-13 77.4 73 52.1
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 1.3e-12 77.0 63 54.0
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 1.7e-12 76.6 92 44.6
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 2.8e-12 75.9 100 46.0
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-12 75.9 91 44.0
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-12 75.9 91 44.0
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 2.8e-12 75.9 89 43.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-12 75.5 62 58.1
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.8e-12 75.1 103 41.7
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 8.2e-12 74.3 64 54.7
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.1e-11 73.9 89 46.1
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 1.8e-11 73.2 65 56.9
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 2.4e-11 72.8 80 47.5
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 4.1e-11 72.0 62 56.5
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 4.1e-11 72.0 62 56.5
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 7.0e-11 71.2 67 55.2
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 9.1e-11 70.9 87 43.7
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-10 70.5 85 45.9
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 3.5e-10 68.9 73 46.6
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 3.5e-10 68.9 73 46.6
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 3.5e-10 68.9 73 46.6
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 5.9e-10 68.2 78 44.9
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-09 67.4 62 56.5
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.1e-08 63.9 47 63.8
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-08 63.5 106 40.6
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-08 63.5 106 40.6
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-08 63.5 106 40.6


User provided reference genes

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