Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 1.9e-86 322.4 152 100.0
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.7e-71 272.7 135 97.0
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.9e-62 242.7 150 77.3
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 1.9e-62 242.7 149 78.5
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.9e-62 242.7 149 78.5
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.7e-61 238.8 152 77.6
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 7.9e-61 237.3 150 77.3
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 1.3e-60 236.5 150 77.3
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.3e-60 236.5 147 78.2
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.3e-60 235.7 149 76.5
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 3.9e-60 235.0 149 77.2
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.3e-55 219.9 148 74.3
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 6.5e-55 217.6 125 82.4
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 7.2e-54 214.2 145 71.0
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 8.2e-50 200.7 144 69.4
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 8.2e-50 200.7 146 69.2
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 3.1e-49 198.7 91 100.0
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 4.1e-49 198.4 138 73.9
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 9.1e-49 197.2 148 65.5
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 2.0e-48 196.1 136 70.6
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 4.5e-48 194.9 134 68.7
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 4.5e-48 194.9 134 68.7
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 5.9e-48 194.5 152 64.5
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 7.7e-48 194.1 136 69.9
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 7.7e-48 194.1 146 67.8
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.3e-47 193.4 146 69.9
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 1.4e-46 189.9 135 68.1
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 1.4e-46 189.9 137 70.1
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 3.2e-46 188.7 135 68.1
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 4.2e-46 188.3 144 64.6
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 4.2e-46 188.3 128 72.7
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 2.1e-45 186.0 120 75.8
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.7e-45 185.7 137 67.9
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 3.6e-45 185.3 146 62.3
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-45 185.3 137 67.2
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 3.6e-45 185.3 133 69.9
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 4.7e-45 184.9 146 62.3
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 4.7e-45 184.9 152 63.2
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 6.1e-45 184.5 146 64.4
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 6.1e-45 184.5 145 64.1
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 7.9e-45 184.1 134 68.7
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 1.0e-44 183.7 135 67.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 2.3e-44 182.6 121 72.7
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.0e-44 182.2 137 67.2
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 3.9e-44 181.8 135 63.7
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 6.7e-44 181.0 146 58.9
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 8.8e-44 180.6 148 60.1
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.1e-43 180.3 133 63.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.1e-43 180.3 133 63.9
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.5e-43 179.9 135 65.9
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.0e-43 179.5 119 72.3
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.6e-43 179.1 147 61.2
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 3.3e-43 178.7 153 62.1
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 4.4e-43 178.3 132 63.6
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 7.4e-43 177.6 134 64.9
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 7.4e-43 177.6 138 64.5
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 7.4e-43 177.6 147 61.9
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 9.7e-43 177.2 136 64.7
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.3e-42 176.8 120 71.7
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 2.2e-42 176.0 156 59.0
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 2.2e-42 176.0 145 62.8
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.8e-42 175.6 120 70.0
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.8e-42 175.6 149 59.1
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.7e-42 175.3 127 65.4
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 4.8e-42 174.9 147 59.9
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 6.3e-42 174.5 144 60.4
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 8.2e-42 174.1 118 73.7
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.8e-41 172.9 148 62.8
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 2.4e-41 172.6 146 61.0
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.4e-41 172.6 132 62.1
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 4.1e-41 171.8 146 61.0
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 7.0e-41 171.0 120 68.3
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 3.5e-40 168.7 162 52.5
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.3e-39 166.8 151 58.3
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 3.8e-39 165.2 141 62.4
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 3.8e-39 165.2 155 57.4
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.1e-38 163.7 131 59.5
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 9.4e-38 160.6 102 72.5
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.6e-37 159.8 100 75.0
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.7e-37 159.1 146 56.2
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 6.1e-37 157.9 137 59.9
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.7e-34 149.8 118 67.8
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 3.7e-34 148.7 100 72.0
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.1e-33 147.1 106 67.9
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 7.0e-33 144.4 100 67.0
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.0e-32 142.9 164 50.6
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 2.0e-32 142.9 100 61.0
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 5.0e-31 138.3 107 66.4
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.5e-30 136.0 75 78.7
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 2.5e-30 136.0 142 52.8
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 8.0e-29 131.0 101 62.4
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.4e-28 130.2 158 44.9
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.2e-27 127.1 92 66.3
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.0e-27 126.3 76 71.1
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.7e-26 123.2 133 51.1
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.4e-25 119.4 96 65.6
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 4.1e-25 118.6 122 49.2
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.6e-24 116.7 118 50.0
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 2.7e-24 115.9 147 44.9
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 3.5e-24 115.5 74 70.3
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.9e-24 114.8 83 65.1
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.5e-22 110.2 124 42.7
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 1.9e-22 109.8 139 43.9
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 1.6e-21 106.7 83 69.9
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 3.6e-21 105.5 90 64.4
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 4.7e-21 105.1 100 54.0
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.3e-20 102.8 112 48.2
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 2.8e-18 95.9 125 44.0
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 2.0e-16 89.7 85 61.2
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 2.7e-16 89.4 127 41.7
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 6.6e-15 84.7 63 66.7
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 5.6e-14 81.6 78 55.1
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.1e-13 79.7 104 41.3
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.1e-13 78.2 75 58.7


User provided reference genes

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