Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 2.0e-64 248.8 117 100.0
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 6.7e-60 233.8 117 94.0
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 6.7e-52 207.2 117 82.9
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 9.7e-51 203.4 117 82.1
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 9.7e-51 203.4 117 82.1
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 1.7e-50 202.6 117 82.1
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 1.7e-50 202.6 117 82.1
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 2.4e-49 198.7 117 78.6
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 2.4e-49 198.7 117 78.6
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 4.5e-48 194.5 117 80.3
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 4.5e-48 194.5 117 80.3
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 6.5e-47 190.7 117 76.1
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.6e-45 186.0 118 75.4
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 6.8e-44 180.6 115 73.0
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 6.8e-44 180.6 115 73.0
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 4.8e-42 174.5 117 72.6
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 2.0e-40 169.1 117 70.9
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 6.6e-39 164.1 117 65.0
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 2.8e-37 158.7 113 69.0
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.8e-34 148.7 105 68.6
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 3.7e-34 148.3 108 65.7
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.0e-31 140.2 108 63.0
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 2.9e-31 138.7 114 62.3
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 9.5e-30 133.7 105 61.0
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 2.7e-24 115.5 114 53.5
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 2.5e-22 109.0 91 59.3
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.6e-21 106.3 91 58.2
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 6.2e-21 104.4 91 58.2
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 6.2e-21 104.4 91 58.2
Carub.0006s3296 Capsella rubella HOM05D004407 ORTHO05D005074 1.8e-20 102.8 100 56.0
Carub.0004s2401 Capsella rubella HOM05D004407 ORTHO05D005074 3.1e-20 102.1 102 56.9
Carub.0006s3434 Capsella rubella HOM05D004407 ORTHO05D005074 2.2e-18 95.9 115 53.9
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-17 92.8 124 41.9
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 1.9e-17 92.8 126 42.9
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 4.1e-17 91.7 124 45.2
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 4.1e-17 91.7 123 43.9
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 1.2e-16 90.1 123 43.1
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 4.6e-16 88.2 120 45.8
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 6.0e-16 87.8 115 45.2
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 1.3e-15 86.7 116 44.0
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.3e-15 86.7 72 54.2
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.3e-15 86.7 74 58.1
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 1.7e-15 86.3 110 47.3
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 2.3e-15 85.9 110 44.5
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 2.3e-15 85.9 113 46.0
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 3.0e-15 85.5 126 42.9
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 3.9e-15 85.1 113 42.5
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 6.6e-15 84.3 125 43.2
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 6.6e-15 84.3 98 50.0
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 8.6e-15 84.0 125 43.2
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 8.6e-15 84.0 127 42.5
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 8.6e-15 84.0 119 45.4
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 1.1e-14 83.6 127 42.5
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 1.5e-14 83.2 130 40.8
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 1.5e-14 83.2 123 43.9
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.5e-14 83.2 123 43.9
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.9e-14 82.8 115 43.5
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 2.5e-14 82.4 74 54.1
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 2.5e-14 82.4 110 42.7
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 3.3e-14 82.0 122 42.6
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 3.3e-14 82.0 109 46.8
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 4.3e-14 81.6 111 43.2
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.3e-14 81.6 119 42.0
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 5.6e-14 81.3 124 39.5
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 5.6e-14 81.3 108 45.4
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.6e-14 81.3 119 42.0
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 5.6e-14 81.3 98 48.0
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 7.3e-14 80.9 121 42.1
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 9.5e-14 80.5 128 39.8
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-13 80.1 104 44.2
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-13 80.1 104 44.2
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.2e-13 80.1 109 43.1
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.6e-13 79.7 122 43.4
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 1.6e-13 79.7 82 48.8
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.6e-13 79.7 108 44.4
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.6e-13 79.7 72 54.2
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 2.1e-13 79.3 124 40.3
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 2.1e-13 79.3 108 41.7
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 2.1e-13 79.3 111 45.9
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 2.1e-13 79.3 111 45.9
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 2.8e-13 79.0 108 45.4
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 2.8e-13 79.0 122 42.6
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 2.8e-13 79.0 121 40.5
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 3.6e-13 78.6 114 42.1
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 3.6e-13 78.6 111 42.3
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 3.6e-13 78.6 71 50.7
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 3.6e-13 78.6 119 43.7
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 4.7e-13 78.2 114 41.2
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 6.2e-13 77.8 122 41.8
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 6.2e-13 77.8 82 46.3
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 6.2e-13 77.8 124 39.5
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 8.1e-13 77.4 122 42.6
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 8.1e-13 77.4 114 41.2
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 1.1e-12 77.0 82 46.3
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.1e-12 77.0 74 48.6
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 1.1e-12 77.0 102 44.1
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 1.1e-12 77.0 72 51.4
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.4e-12 76.6 92 45.7
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.4e-12 76.6 104 43.3
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 1.4e-12 76.6 79 51.9
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 1.8e-12 76.3 72 50.0
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.8e-12 76.3 106 43.4
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 1.8e-12 76.3 110 42.7
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.3e-12 75.9 105 46.7
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.3e-12 75.9 105 46.7
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 2.3e-12 75.9 73 49.3
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 2.3e-12 75.9 81 45.7
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 3.1e-12 75.5 65 56.9
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.1e-12 75.5 70 54.3
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 3.1e-12 75.5 81 45.7
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 4.0e-12 75.1 111 41.4
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 4.0e-12 75.1 114 41.2
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 4.0e-12 75.1 118 40.7
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.9e-12 73.9 112 40.2
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 8.9e-12 73.9 60 58.3
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 8.9e-12 73.9 60 58.3
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 1.2e-11 73.6 120 40.8
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 1.2e-11 73.6 63 55.6
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 1.2e-11 73.6 71 49.3
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.2e-11 73.6 68 52.9
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.5e-11 73.2 105 45.7
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 1.5e-11 73.2 72 50.0
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 2.6e-11 72.4 71 50.7
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 3.4e-11 72.0 116 37.9
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 3.4e-11 72.0 73 46.6
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.4e-11 71.6 64 54.7
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 7.5e-11 70.9 66 50.0
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 1.3e-10 70.1 76 43.4
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 1.7e-10 69.7 82 46.3
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 2.9e-10 68.9 63 52.4
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 3.7e-10 68.6 101 39.6
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 3.7e-10 68.6 72 45.8
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.7e-10 68.6 72 45.8
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 3.7e-10 68.6 65 47.7
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 4.9e-10 68.2 65 49.2
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 4.9e-10 68.2 65 49.2
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 1.1e-09 67.0 106 41.5
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.1e-09 67.0 109 38.5
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 1.1e-09 67.0 72 44.4
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.4e-09 66.6 106 40.6
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.4e-09 66.6 73 45.2
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 1.4e-09 66.6 73 45.2
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 2.4e-09 65.9 68 50.0
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 2.4e-09 65.9 126 38.9
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 2.4e-09 65.9 64 53.1
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 3.5e-08 62.0 65 50.8
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 3.5e-08 62.0 80 42.5
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 6.0e-08 61.2 128 35.2
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 7.8e-08 60.8 94 39.4
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 1.0e-07 60.5 52 53.8
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.7e-07 59.7 124 36.3
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.3e-07 59.3 72 40.3
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 3.9e-07 58.5 125 33.6
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 6.6e-07 57.8 121 35.5
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 3.3e-06 55.5 120 32.5
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 9.5e-06 53.9 113 34.5


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