Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 3.6e-82 308.1 152 100.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 2.8e-74 282.0 152 89.5
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 5.3e-73 277.7 156 89.1
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 5.3e-73 277.7 156 89.1
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.2e-72 276.6 154 90.9
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 2.0e-72 275.8 154 91.6
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 2.0e-72 275.8 152 88.8
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 2.2e-71 272.3 154 90.3
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 4.9e-71 271.2 153 87.6
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 4.9e-71 271.2 153 87.6
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.9e-70 269.2 153 86.9
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 4.6e-69 264.6 153 85.6
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.1e-67 260.0 153 84.3
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 1.4e-65 253.1 148 85.1
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 4.1e-65 251.5 156 84.6
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 2.6e-64 248.8 152 83.6
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 3.8e-63 245.0 155 81.9
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 8.2e-50 200.7 152 69.7
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 1.2e-48 196.8 109 90.8
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 3.7e-42 175.3 152 60.5
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.2e-40 170.2 136 62.5
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.6e-40 169.9 143 60.8
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.6e-40 169.1 114 75.4
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 3.5e-40 168.7 103 75.7
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 4.5e-40 168.3 110 76.4
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 5.9e-40 167.9 137 63.5
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 5.9e-40 167.9 136 63.2
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 7.7e-40 167.5 110 76.4
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.3e-39 166.8 102 82.4
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.7e-39 166.4 103 74.8
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.7e-39 166.4 136 64.0
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 2.2e-39 166.0 138 58.7
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 3.8e-39 165.2 143 61.5
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.1e-38 163.7 110 74.5
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 3.2e-38 162.2 101 77.2
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 3.2e-38 162.2 152 55.3
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 4.2e-38 161.8 132 63.6
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 5.5e-38 161.4 103 72.8
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 5.5e-38 161.4 116 71.6
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.2e-38 161.0 110 72.7
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 9.4e-38 160.6 129 62.8
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 9.4e-38 160.6 131 62.6
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.2e-37 160.2 144 59.0
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.6e-37 159.8 93 79.6
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.6e-37 159.8 148 56.8
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.1e-37 159.5 102 75.5
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 3.6e-37 158.7 93 82.8
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 3.6e-37 158.7 93 79.6
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.6e-37 158.7 94 80.9
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 6.1e-37 157.9 88 84.1
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 6.1e-37 157.9 127 64.6
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 8.0e-37 157.5 144 61.1
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.0e-36 157.1 88 86.4
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.0e-36 157.1 117 70.9
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 1.4e-36 156.8 105 75.2
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.4e-36 156.8 142 59.2
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 2.3e-36 156.0 138 59.4
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.0e-36 155.6 110 72.7
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 3.0e-36 155.6 109 72.5
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 4.0e-36 155.2 107 73.8
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 4.0e-36 155.2 97 78.4
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 4.0e-36 155.2 107 75.7
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 4.0e-36 155.2 129 60.5
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 4.0e-36 155.2 86 84.9
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 8.8e-36 154.1 99 77.8
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 8.8e-36 154.1 103 72.8
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.5e-35 153.3 97 77.3
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.5e-35 153.3 94 76.6
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.6e-35 152.5 91 76.9
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.6e-35 152.5 91 76.9
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 3.3e-35 152.1 99 73.7
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 3.3e-35 152.1 99 77.8
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 3.3e-35 152.1 114 64.9
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 4.4e-35 151.8 96 74.0
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 9.7e-35 150.6 116 67.2
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.3e-34 150.2 103 72.8
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.3e-34 150.2 100 77.0
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 3.7e-34 148.7 99 73.7
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 4.8e-34 148.3 91 73.6
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 4.8e-34 148.3 81 84.0
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 6.3e-34 147.9 88 80.7
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 8.2e-34 147.5 113 69.0
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.1e-33 147.1 92 76.1
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.8e-33 146.4 130 59.2
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 3.1e-33 145.6 91 72.5
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 5.3e-33 144.8 110 69.1
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.3e-33 144.8 91 76.9
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 9.1e-33 144.1 106 68.9
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.7e-32 142.5 82 80.5
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 3.5e-32 142.1 83 80.7
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.5e-32 141.7 81 81.5
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.2e-30 135.6 103 68.0
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 6.1e-29 131.3 71 83.1
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 9.8e-27 124.0 87 69.0
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.7e-26 123.2 80 71.2
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 6.3e-26 121.3 68 79.4
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 1.1e-25 120.6 102 59.8
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.4e-25 120.2 132 53.8
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 8.5e-23 110.9 75 70.7
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.5e-22 110.2 105 55.2
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.2e-21 107.1 121 53.7
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 4.7e-21 105.1 79 63.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 6.1e-21 104.8 122 50.8
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.4e-19 99.0 56 83.9
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 2.7e-16 89.4 74 68.9
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 1.7e-15 86.7 68 66.2


User provided reference genes

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