Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.7e-121 438.7 232 100.0
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.3e-86 323.6 234 79.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.5e-79 300.1 237 77.2
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.4e-77 293.5 237 75.9
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 6.0e-68 261.5 236 68.2
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 7.6e-55 218.0 243 56.4
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 6.4e-54 214.9 248 55.6
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.2e-53 212.6 238 57.1
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.6e-52 210.3 240 57.9
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 6.0e-52 208.4 250 58.4
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 9.6e-50 201.1 251 50.6
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 4.8e-49 198.7 240 55.8
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 8.7e-43 177.9 235 51.9
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.0e-31 140.2 245 41.2
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 7.6e-31 138.3 226 42.9
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.5e-30 135.2 241 41.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 6.5e-30 135.2 240 42.1
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.4e-29 134.0 241 41.5
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.5e-29 133.3 241 41.5
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.1e-28 130.2 266 39.8
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 3.5e-28 129.4 250 39.2
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.8e-27 127.1 243 38.7
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.1e-26 124.4 249 41.4
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.9e-26 123.6 261 39.5
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 5.7e-26 122.1 232 43.1
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 7.4e-26 121.7 237 44.3
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.4e-26 121.7 253 39.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.8e-25 119.0 251 38.6
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 8.2e-25 118.2 259 38.6
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.4e-24 117.5 246 40.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 3.1e-24 116.3 256 39.1
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 4.1e-24 115.9 251 36.7
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 5.3e-24 115.5 245 37.1
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 9.0e-24 114.8 249 38.6
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.2e-23 114.4 268 38.1
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.2e-23 114.4 250 38.8
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.5e-23 114.0 252 35.7
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 3.4e-23 112.8 251 37.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.5e-23 112.5 246 39.8
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 7.6e-23 111.7 274 36.5
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.0e-22 111.3 240 37.5
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.0e-22 111.3 262 37.0
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.3e-22 110.9 241 36.9
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.3e-22 110.9 249 36.5
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.7e-22 110.5 258 38.4
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.7e-22 110.5 243 38.3
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.9e-22 109.8 272 37.9
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 2.9e-22 109.8 272 37.9
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.9e-22 109.8 237 39.2
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 3.8e-22 109.4 258 38.0
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.1e-21 107.8 253 38.3
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.4e-21 107.5 234 39.3
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.9e-21 107.1 237 38.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.2e-21 105.9 260 39.6
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 9.4e-21 104.8 239 37.7
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.6e-20 104.0 252 36.9
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.6e-20 104.0 253 37.2
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.1e-20 103.6 205 40.0
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.7e-20 103.2 267 35.2
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 6.1e-20 102.1 237 38.0
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 7.9e-20 101.7 248 38.7
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 7.9e-20 101.7 238 38.2
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 3.0e-19 99.8 260 34.6
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.0e-19 99.8 279 34.4
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.9e-19 99.4 282 33.7
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 5.1e-19 99.0 238 37.8
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 6.7e-19 98.6 260 37.3
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.7e-19 98.6 267 33.7
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.7e-19 98.6 227 41.0
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.1e-18 97.8 144 44.4
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.9e-18 97.1 267 34.5
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.9e-18 97.1 249 37.8
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.5e-18 96.7 223 40.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 5.7e-18 95.5 264 33.7
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.7e-18 95.5 289 31.8
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 5.7e-18 95.5 242 36.4
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.4e-18 95.1 238 37.4
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 7.4e-18 95.1 145 45.5
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.7e-17 94.0 239 35.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.2e-17 93.6 242 34.3
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.2e-17 93.6 272 34.2
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.7e-17 92.8 274 33.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 8.2e-17 91.7 181 37.6
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.1e-16 91.3 131 46.6
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.8e-16 90.5 175 40.0
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 4.1e-16 89.4 273 33.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 6.9e-16 88.6 229 34.1
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.2e-15 87.8 269 32.7
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.2e-15 87.8 269 32.7
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.5e-15 87.4 304 28.9
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.4e-15 86.3 129 42.6
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.4e-15 86.3 246 33.7
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 4.5e-15 85.9 282 29.4
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 7.7e-15 85.1 242 35.5
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.0e-14 84.7 170 36.5
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-14 84.3 226 36.7
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.3e-14 84.3 226 36.7
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.3e-14 84.3 229 34.5
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.7e-14 84.0 149 36.2
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-14 84.0 284 30.3
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.1e-13 81.3 149 39.6
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-13 80.9 272 31.2
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 4.2e-13 79.3 241 34.0
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 7.2e-13 78.6 251 32.7
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 3.6e-12 76.3 203 33.5
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 6.1e-12 75.5 242 34.3
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 5.1e-11 72.4 159 41.5
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.5e-10 70.9 190 34.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.4e-10 69.3 129 38.0
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 7.4e-10 68.6 257 31.5
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 3.7e-09 66.2 190 32.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 6.3e-09 65.5 210 32.9
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.1e-08 64.7 138 36.2
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.5e-07 59.3 273 28.9


User provided reference genes

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