Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02332 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-76 287.7 141 100.0
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-49 199.5 100 99.0
BcaC09g48632 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-22 108.2 88 65.9
BraA01t02116Z Brassica rapa HOM05D000313 ORTHO05D000065 4.8e-20 101.7 116 50.0
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-20 101.3 118 50.0
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-20 100.9 112 48.2
A07p11070 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-20 100.9 118 49.2
C03p10480 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-20 100.9 112 48.2
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-19 99.8 118 50.0
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-19 99.0 118 49.2
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-19 99.0 118 49.2
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-19 98.2 118 49.2
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-19 97.4 118 48.3
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-18 96.7 118 48.3
BraA08t34048Z Brassica rapa HOM05D000313 ORTHO05D000065 5.9e-18 94.7 119 47.1
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-17 94.0 118 45.8
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-17 92.8 118 45.8
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 5.0e-17 91.7 125 45.6
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-17 91.3 118 44.9
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-17 91.3 118 44.9
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-17 91.3 118 44.9
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-17 91.3 118 44.9
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-16 90.5 118 44.9
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-16 90.5 118 44.9
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-16 90.5 118 44.9
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-16 90.1 115 48.7
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-16 90.1 128 41.4
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-16 89.7 115 48.7
BraA07t29209Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-16 89.7 118 44.9
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-16 89.4 135 43.0
A01p05990 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-16 89.4 138 42.0
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-16 89.4 118 44.1
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-16 89.4 118 44.1
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-16 89.0 118 44.1
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-16 89.0 118 43.2
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-16 89.0 103 50.5
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-16 88.6 118 44.1
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-16 88.6 118 44.9
BolC1t04726H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-16 88.6 69 66.7
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-16 88.6 118 44.1
BraA06t24100Z Brassica rapa HOM05D000313 ORTHO05D000065 4.2e-16 88.6 69 60.9
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-16 88.2 120 46.7
BraA09t40157Z Brassica rapa HOM05D000313 ORTHO05D000065 5.5e-16 88.2 69 62.3
BcaB01g01233 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-16 87.8 141 42.6
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-16 87.8 131 42.0
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-16 87.4 114 43.9
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-16 87.4 69 62.3
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-16 87.4 69 62.3
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-16 87.4 118 44.1
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-16 87.4 69 62.3
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-16 87.4 69 62.3
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-15 87.0 118 44.1
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-15 87.0 118 44.1
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-15 86.3 113 46.9
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-15 86.3 114 43.9
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-15 86.3 113 46.9
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-15 85.9 97 47.4
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-15 85.9 118 42.4
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-15 85.9 69 59.4
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-15 85.9 118 42.4
BolC1t05664H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-15 85.9 69 58.0
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-15 85.9 118 42.4
C01p47570 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-15 85.5 69 65.2
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-15 84.7 118 43.2
C03p69800 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-15 84.3 51 76.5
C06p09070 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-15 84.3 51 76.5
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-14 84.0 69 58.0
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-14 83.6 69 59.4
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-14 83.6 118 42.4
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-14 83.6 118 42.4
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-14 83.6 109 44.0
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-14 83.6 122 44.3
BcaC05g27418 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-14 83.2 88 52.3
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-14 83.2 118 44.9
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-14 83.2 118 44.9
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-14 82.4 118 40.7
BolC3t16695H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-14 82.4 112 45.5
BcaC08g44117 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-14 81.6 66 60.6
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-14 81.3 109 44.0
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 8.8e-14 80.9 94 53.2
BcaB07g31634 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-13 80.1 108 45.4
BcaC03g16977 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-13 80.1 60 63.3
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 1.5e-13 80.1 60 63.3
C03p84400 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-13 78.6 64 60.9
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-13 78.6 98 45.9
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-13 78.2 81 50.6
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-13 78.2 117 41.9
BolC5t33926H Brassica oleracea HOM05D000313 ORTHO05D000065 7.4e-13 77.8 65 60.0
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-12 76.3 118 38.1
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-12 76.3 65 58.5
A03p06240 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-12 75.9 116 41.4
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-12 75.1 125 37.6
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-12 74.7 117 43.6
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-12 74.3 118 37.3
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-12 74.3 118 41.5
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-12 74.3 117 38.5
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-12 74.3 103 46.6
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 8.2e-12 74.3 117 38.5
BolC6t35659H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-11 73.9 50 66.0
A06p21080 Brassica napus HOM05D000808 ORTHO05D000065 1.4e-11 73.6 76 52.6
BcaNung07020 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-11 73.2 51 68.6
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-10 70.5 67 52.2
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-10 69.3 70 48.6
C08p08660 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-10 69.3 61 65.6
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-10 68.9 100 44.0
BolC4t27877H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-10 68.2 60 58.3
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-09 67.4 95 42.1
A03p61800 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-09 65.9 58 55.2
BcaB05g21583 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-09 65.5 53 64.2
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-08 63.9 73 49.3
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-08 63.2 99 43.4
BcaB04g18556 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-08 62.8 53 62.3
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-08 62.4 95 41.1
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-08 61.6 98 38.8
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-08 61.2 71 40.8
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-08 61.2 71 40.8
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-08 61.2 71 40.8
A01p37550 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.5 52 55.8
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-07 60.5 40 70.0
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-07 60.1 69 43.5
BcaB06g28304 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-07 58.9 75 46.7
BolC2t09079H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-07 58.9 36 72.2
BcaC05g28353 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-07 58.2 90 41.1
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 57.0 79 35.4
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-06 56.6 83 33.7
BolC7t42616H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 56.2 37 67.6
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 5.2e-06 55.1 69 36.2
BcaC01g05668 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-06 54.7 93 36.6
BolC9t57162H Brassica oleracea HOM05D023845 ORTHO05D024282 8.8e-06 54.3 43 55.8


User provided reference genes

Program Settings