Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.0e-306 1055.8 510 100.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.0e-306 1055.8 510 100.0
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 8.2e-304 1046.2 510 99.0
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.1e-292 1009.2 510 94.7
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 7.0e-287 989.9 510 92.9
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.1e-283 978.4 557 86.5
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 4.0e-282 974.2 504 92.1
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 7.5e-265 916.8 494 90.5
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.9e-263 912.1 495 88.1
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 9.2e-255 883.2 508 81.9
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 2.3e-229 798.9 527 74.2
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 2.5e-220 768.8 504 72.0
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.0e-213 746.9 500 70.8
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.9e-212 742.7 498 70.9
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 4.3e-212 741.5 501 69.7
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.3e-211 740.0 499 69.7
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 8.2e-211 737.3 504 68.8
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.4e-210 736.5 504 69.2
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 1.8e-210 736.1 382 90.6
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 4.1e-210 734.9 503 69.4
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 5.3e-210 734.6 499 69.9
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.5e-209 733.0 500 69.6
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.5e-209 733.0 500 69.6
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 5.9e-209 731.1 498 69.5
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 1.7e-208 729.6 496 68.8
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 2.2e-208 729.2 507 68.0
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.9e-208 728.8 498 69.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 3.8e-208 728.4 483 70.6
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 5.0e-208 728.0 501 69.7
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 5.0e-208 728.0 508 68.3
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 5.0e-208 728.0 495 69.1
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.4e-207 726.5 495 69.9
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 3.2e-207 725.3 507 69.6
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 5.5e-207 724.5 498 69.3
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 7.2e-207 724.2 503 67.6
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.1e-206 722.6 482 69.9
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 3.6e-206 721.8 485 70.1
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 6.1e-206 721.1 495 68.1
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.8e-205 719.5 504 67.9
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 3.0e-205 718.8 481 68.4
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 5.1e-205 718.0 499 67.7
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 8.7e-205 717.2 492 68.3
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.9e-204 716.1 497 68.2
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 7.4e-204 714.1 501 68.7
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 7.4e-204 714.1 481 69.9
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.6e-203 713.0 478 68.8
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 3.7e-203 711.8 485 69.7
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.1e-202 710.3 494 68.0
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.1e-202 710.3 504 67.1
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.4e-202 709.1 503 67.0
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.3e-202 708.0 504 66.9
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 5.3e-202 708.0 507 65.7
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.5e-201 706.4 506 67.0
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 2.6e-201 705.7 541 62.8
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 5.9e-201 704.5 481 68.8
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.0e-200 703.7 508 66.1
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.7e-200 703.0 478 67.8
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 2.2e-200 702.6 478 68.0
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 5.0e-200 701.4 501 66.1
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.4e-199 699.9 506 66.4
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.9e-199 699.5 502 66.9
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.9e-199 699.5 481 67.2
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 7.2e-199 697.6 506 65.4
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 9.4e-199 697.2 479 67.6
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.2e-198 696.8 497 66.8
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.6e-198 696.4 482 67.2
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.6e-198 696.4 516 63.6
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.6e-198 696.4 502 66.5
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.1e-198 696.0 481 68.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 7.9e-198 694.1 463 70.6
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 3.0e-197 692.2 501 65.5
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 1.1e-196 690.3 493 66.7
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.6e-196 689.1 501 65.3
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 5.7e-196 688.0 377 85.9
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 7.4e-196 687.6 512 64.6
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 9.7e-196 687.2 495 64.6
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.7e-195 686.4 497 65.4
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 8.2e-195 684.1 503 64.6
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.4e-194 682.6 496 64.1
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 9.1e-194 680.6 464 69.4
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 5.9e-193 677.9 512 63.7
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 5.9e-193 677.9 505 65.1
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.5e-191 672.5 470 67.2
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 7.2e-191 671.0 478 65.3
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.1e-190 669.5 481 64.9
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 5.2e-189 664.8 480 65.2
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 4.4e-188 661.8 506 62.8
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.3e-187 660.2 450 69.3
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 1.4e-186 656.8 446 68.2
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.8e-186 656.4 477 63.5
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.2e-184 649.4 495 62.0
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 5.0e-184 648.3 515 61.2
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.9e-183 646.4 476 61.8
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.0e-180 636.3 452 67.3
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.3e-178 628.2 501 60.9
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.7e-174 615.9 501 60.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.8e-162 576.6 479 59.5
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.7e-160 570.1 511 53.6
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 8.3e-139 498.0 340 68.8
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 8.3e-139 498.0 341 68.9
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.7e-126 455.7 357 59.7
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.6e-111 405.6 314 62.1
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.3e-110 404.4 307 63.5
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.6e-108 395.2 489 46.0
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 3.3e-87 326.6 234 59.4
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 2.4e-77 293.9 214 57.9
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.5e-66 258.1 184 66.3
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.0e-64 250.4 169 67.5
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 3.7e-54 216.9 148 63.5
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.3e-51 208.4 139 70.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 5.1e-19 100.1 104 51.0
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 4.6e-12 77.0 78 50.0
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 8.7e-11 72.8 53 52.8
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 1.9e-10 71.6 86 45.3


User provided reference genes

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