Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 2.5e-167 592.0 306 100.0
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 4.5e-124 448.4 335 73.4
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 7.5e-119 431.0 336 72.0
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 9.8e-119 430.6 335 71.0
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 1.7e-115 419.9 334 69.5
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 8.6e-115 417.5 335 69.9
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 4.3e-114 415.2 334 70.4
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 1.6e-113 413.3 334 69.2
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 1.6e-113 413.3 334 69.2
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 3.1e-112 409.1 334 68.9
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 4.9e-110 401.7 359 64.9
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 8.3e-110 401.0 334 68.3
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 1.2e-108 397.1 334 67.7
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 1.3e-107 393.7 334 67.1
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 2.3e-107 392.9 334 67.7
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 6.6e-107 391.3 336 66.1
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 2.6e-103 379.4 295 71.9
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 2.4e-101 372.9 295 71.2
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.4e-96 357.1 334 60.5
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 3.8e-94 349.0 342 58.5
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 3.2e-93 345.9 338 56.5
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 2.7e-92 342.8 334 58.1
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 3.5e-92 342.4 334 59.3
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.0e-91 340.9 334 57.8
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.0e-91 340.9 334 57.5
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.0e-91 340.9 334 57.5
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.3e-91 340.5 333 58.9
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 3.9e-91 339.0 333 56.2
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 3.9e-91 339.0 336 56.8
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 3.9e-91 339.0 338 57.7
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 5.1e-91 338.6 334 57.8
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.2e-89 334.0 334 56.9
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 1.6e-89 333.6 335 58.2
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.6e-89 332.4 328 56.4
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 4.0e-88 328.9 334 56.9
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 5.3e-88 328.6 378 52.1
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.0e-87 326.6 334 56.9
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.4e-87 325.9 328 55.5
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 3.4e-87 325.9 338 55.9
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 5.8e-87 325.1 334 56.9
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 9.9e-87 324.3 366 51.9
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 6.4e-86 321.6 338 56.8
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 1.1e-85 320.9 335 55.8
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 9.3e-85 317.8 341 53.4
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 2.1e-84 316.6 398 50.3
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.6e-84 315.5 340 55.0
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 7.8e-84 314.7 336 55.7
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.3e-83 313.2 336 55.7
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 2.3e-83 313.2 332 53.3
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.3e-82 309.3 334 53.3
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 9.6e-82 307.8 334 51.5
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 1.6e-81 307.0 334 54.5
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 1.6e-81 307.0 333 52.0
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 2.1e-81 306.6 335 52.8
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 2.1e-81 306.6 333 53.2
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 2.8e-81 306.2 334 51.2
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 2.8e-81 306.2 334 52.1
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 3.6e-81 305.8 334 51.2
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 3.6e-81 305.8 334 51.5
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 1.4e-80 303.9 333 51.7
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 4.0e-80 302.4 334 53.6
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 5.3e-80 302.0 333 52.3
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 5.3e-80 302.0 334 51.8
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 5.3e-80 302.0 318 54.4
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 6.9e-80 301.6 334 52.1
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 6.9e-80 301.6 334 53.3
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 1.2e-79 300.8 320 54.1
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 2.6e-79 299.7 333 52.0
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 2.6e-79 299.7 335 51.6
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 3.4e-79 299.3 335 51.6
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 3.4e-79 299.3 321 53.6
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 4.5e-79 298.9 323 53.9
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 4.5e-79 298.9 321 52.6
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 9.9e-79 297.7 321 53.3
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 9.9e-79 297.7 321 53.6
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 4.9e-78 295.4 319 53.0
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.4e-77 293.9 319 53.0
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 2.4e-77 293.1 333 50.5
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 2.4e-77 293.1 323 52.3
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 3.2e-77 292.7 323 52.6
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 3.2e-77 292.7 326 51.8
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 4.2e-77 292.4 322 53.1
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 1.2e-76 290.8 324 50.6
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 2.1e-76 290.0 326 51.5
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 2.7e-76 289.7 324 51.5
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 2.7e-76 289.7 330 52.4
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 4.6e-76 288.9 334 50.6
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 1.8e-75 287.0 317 51.1
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 2.3e-75 286.6 424 45.0
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 3.0e-75 286.2 333 49.5
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 5.1e-75 285.4 336 49.7
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 8.7e-75 284.6 336 49.4
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 2.5e-74 283.1 333 51.1
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.3e-73 280.8 337 49.9
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 1.6e-73 280.4 336 48.8
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.1e-72 277.7 327 52.3
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.5e-71 273.9 297 54.5
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 7.6e-71 271.6 334 49.4
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 1.3e-70 270.8 323 49.2
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 1.7e-70 270.4 455 40.2
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 3.2e-69 266.2 320 50.6
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 3.2e-69 266.2 325 51.1
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 4.2e-69 265.8 254 57.9
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 8.7e-67 258.1 215 62.8
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 5.7e-66 255.4 295 50.8
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 6.2e-65 251.9 355 45.6
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-64 251.1 347 45.2
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 1.4e-64 250.8 344 46.5
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 9.0e-64 248.1 329 45.3
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 4.5e-63 245.7 354 42.7
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.9e-62 243.0 215 61.4
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 8.4e-62 241.5 320 47.2
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 1.1e-61 241.1 332 44.6
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 3.2e-61 239.6 322 47.5
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 5.5e-61 238.8 329 44.1
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 9.3e-61 238.0 321 46.4
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 1.6e-57 227.3 255 50.6
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 4.8e-57 225.7 320 42.8
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 1.2e-55 221.1 289 45.0
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.2e-52 211.1 301 43.5
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 9.1e-48 194.9 348 38.5
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-47 194.5 225 50.2
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.4e-45 187.6 343 37.6
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 2.3e-43 180.3 313 37.7
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 5.9e-39 165.6 328 37.5
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 2.5e-37 160.2 364 32.4
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 5.5e-37 159.1 216 40.7
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 2.3e-35 153.7 160 53.1
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 3.9e-35 152.9 179 49.2
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 7.4e-34 148.7 169 47.9
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 9.7e-34 148.3 175 48.0
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 3.7e-33 146.4 169 46.7
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 4.8e-33 146.0 204 43.1
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 5.9e-31 139.0 326 32.5
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 1.3e-30 137.9 286 32.2
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 6.3e-25 119.0 259 32.0
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 4.2e-21 106.3 119 51.3
TPR.G7717 Trifolium pratense HOM05D003580 ORTHO05D004441 5.5e-21 105.9 121 47.9
QL01p051624 Quercus lobata HOM05D003580 ORTHO05D004441 7.5e-18 95.5 97 54.6
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 3.8e-14 83.2 92 52.2
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 1.9e-13 80.9 216 29.6
PSO063G6607 Papaver somniferum HOM05D003580 ORTHO05D004441 1.2e-12 78.2 97 45.4
Cpa.g.c39794 Carica papaya HOM05D003580 ORTHO05D004441 1.4e-11 74.7 65 66.2
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 1.2e-10 71.6 247 27.9
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 4.4e-10 69.7 75 50.7


User provided reference genes

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