Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02197 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-54 216.1 103 100.0
BcaC03g18442 Brassica carinata HOM05D000171 ORTHO05D000101 4.3e-26 121.3 100 63.0
BraA02t05286Z Brassica rapa HOM05D000171 ORTHO05D000101 5.6e-26 120.9 100 62.0
C02p07900 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-25 119.8 100 62.0
BcaC03g18443 Brassica carinata HOM05D000171 ORTHO05D000101 8.1e-25 117.1 83 68.7
C02p07910 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-24 115.5 84 65.5
BolC2t06714H Brassica oleracea HOM05D000171 ORTHO05D000101 2.4e-24 115.5 84 65.5
BcaNung02196 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-19 99.8 91 59.3
Sp6g28450 Schrenkiella parvula HOM05D000171 ORTHO05D000101 4.0e-16 88.2 72 61.1
AT4G11590 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.3e-16 87.8 74 60.8
Carub.0006s1381 Capsella rubella HOM05D000171 ORTHO05D000101 2.6e-15 85.5 72 61.1
CARHR197660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.6e-15 85.5 83 54.2
Carub.0006s3067 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-15 85.1 79 59.5
BolC9t58984H Brassica oleracea HOM05D000837 ORTHO05D000101 7.6e-15 84.0 72 56.9
AL6G26510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.9e-15 83.6 87 48.3
C09p61460 Brassica napus HOM05D000171 ORTHO05D000101 3.8e-14 81.6 76 53.9
Thhalv10015249m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.4e-14 80.5 76 51.3
BcaB08g36894 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-13 78.2 73 52.1
BcaC04g18943 Brassica carinata HOM05D000171 ORTHO05D000101 9.3e-13 77.0 73 53.4
C09p61450 Brassica napus HOM05D000171 ORTHO05D000101 9.3e-13 77.0 73 53.4
BcaB08g36892 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-12 76.6 73 52.1
A10p23320 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-12 76.3 80 50.0
AT5G15660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.1e-12 75.9 74 51.4
BcaC04g18942 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-12 75.9 77 50.6
C09p61400 Brassica napus HOM05D000171 ORTHO05D000101 2.1e-12 75.9 77 50.6
BraA10t44400Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-12 75.9 80 50.0
AT1G31000 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.0e-11 72.0 72 54.2
AL1G39230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.9e-11 71.6 79 48.1
AT5G15670 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.9e-11 71.6 70 57.1
BolC9t58983H Brassica oleracea HOM05D000171 ORTHO05D000101 5.1e-11 71.2 74 48.6
AT1G26510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.6e-11 70.9 87 47.1
A02p04340 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-11 70.9 76 47.4
BolC2t08669H Brassica oleracea HOM05D000171 ORTHO05D000101 6.6e-11 70.9 76 47.4
AT1G26515 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.1e-10 70.1 77 50.6
BcaB08g36896 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-10 70.1 83 45.8
BcaC03g15049 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-10 69.7 76 47.4
C02p09190 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-10 68.9 78 43.6
Carub.0006s1382 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-09 66.2 85 44.7
Thhalv10009644m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.8e-09 65.5 72 41.7
C02p25920 Brassica napus HOM05D000171 ORTHO05D021829 4.8e-09 64.7 69 49.3
Thhalv10000202m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.2e-09 64.3 65 49.2
THA.LOC104805854 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 6.2e-09 64.3 66 47.0
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 8.1e-09 63.9 66 42.4
C02p22670 Brassica napus HOM05D000171 ORTHO05D000101 8.1e-09 63.9 66 43.9
BolC2t08420H Brassica oleracea HOM05D000171 ORTHO05D000101 8.1e-09 63.9 66 43.9
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 8.1e-09 63.9 66 42.4
CARHR147780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.4e-08 62.4 79 35.4
AL7G10750 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.0e-08 61.6 83 42.2
A02p14050 Brassica napus HOM05D000171 ORTHO05D000101 4.0e-08 61.6 67 46.3
C09p61420 Brassica napus HOM05D000171 ORTHO05D000101 4.0e-08 61.6 62 45.2
BraA02t06466Z Brassica rapa HOM05D000171 ORTHO05D000101 4.0e-08 61.6 67 46.3
THA.LOC104821034 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 4.0e-08 61.6 84 42.9
Carub.0004s0507 Capsella rubella HOM05D000171 ORTHO05D000101 5.3e-08 61.2 66 45.5
AT4G38870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.9e-08 60.8 66 45.5
BcaC03g14813 Brassica carinata HOM05D000171 ORTHO05D000101 6.9e-08 60.8 67 44.8
C02p22650 Brassica napus HOM05D000171 ORTHO05D000101 6.9e-08 60.8 67 44.8
BolC2t08418H Brassica oleracea HOM05D000171 ORTHO05D000101 6.9e-08 60.8 67 44.8
Carub.0006s1309 Capsella rubella HOM05D000171 ORTHO05D000101 6.9e-08 60.8 82 36.6
Carub.0006s0576 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-07 60.1 69 43.5
Thhalv10019453m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-07 60.1 72 45.8
THA.LOC104821025 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 1.2e-07 60.1 72 44.4
A07p32590 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-07 59.7 71 42.3
C04p61620 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-07 59.7 79 41.8
BraA07t30883Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-07 59.7 71 42.3
AT1G47810 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.0e-07 59.3 82 39.0
C08p24480 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-07 59.3 68 42.6
BolC4t27645H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-07 59.3 69 37.7
BolC8t50066H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-07 59.3 67 43.3
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-07 59.3 74 45.9
BcaB03g15211 Brassica carinata HOM05D000171 ORTHO05D000101 2.6e-07 58.9 63 49.2
CARHR058080 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.6e-07 58.9 73 43.8
BolC4t27646H Brassica oleracea HOM05D000171 ORTHO05D000101 3.4e-07 58.5 79 41.8
BraA04t17987Z Brassica rapa HOM05D000171 ORTHO05D000101 3.4e-07 58.5 63 47.6
AL2G14020 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-07 58.2 89 44.9
BcaB06g28548 Brassica carinata HOM05D000171 ORTHO05D000101 4.5e-07 58.2 66 45.5
Carub.0006s0263 Capsella rubella HOM05D000171 ORTHO05D000101 4.5e-07 58.2 69 42.0
A02p04320 Brassica napus HOM05D000171 ORTHO05D000101 5.8e-07 57.8 71 40.8
BraA02t05394Z Brassica rapa HOM05D000171 ORTHO05D000101 5.8e-07 57.8 71 40.8
CARHR049440 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.8e-07 57.8 74 39.2
A04p24910 Brassica napus HOM05D000171 ORTHO05D000101 7.6e-07 57.4 62 45.2
BolC4t27669H Brassica oleracea HOM05D000171 ORTHO05D000101 7.6e-07 57.4 62 45.2
BraA04t18005Z Brassica rapa HOM05D000171 ORTHO05D000101 7.6e-07 57.4 62 45.2
Thhalv10023891m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-07 57.4 76 42.1
Aa31LG7G12760 Aethionema arabicum HOM05D000171 ORTHO05D000101 9.9e-07 57.0 65 40.0
A04p24850 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-07 57.0 79 41.8
A06p18290 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-07 57.0 68 44.1
BraA06t24912Z Brassica rapa HOM05D000171 ORTHO05D000101 9.9e-07 57.0 68 44.1
Aa31LG4G12430 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.3e-06 56.6 73 39.7
BcaC03g13528 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-06 56.6 69 46.4
C02p09150 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-06 56.6 69 46.4
BolC2t06827H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-06 56.6 69 46.4
BcaB02g07174 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-06 56.2 74 44.6
A02p02780 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-06 56.2 62 50.0
AL2G14000 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-06 55.8 87 42.5
C04p61880 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-06 55.8 62 43.5
BraA04t17999Z Brassica rapa HOM05D000171 ORTHO05D000101 2.2e-06 55.8 61 44.3
Thhalv10015726m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.2e-06 55.8 82 41.5
AT1G67130 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.9e-06 55.5 71 36.6
Carub.0006s2776 Capsella rubella HOM05D000171 ORTHO05D000101 2.9e-06 55.5 63 47.6
C02p07390 Brassica napus HOM05D000171 ORTHO05D000101 3.8e-06 55.1 62 48.4
Sp4g14420 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.8e-06 55.1 66 40.9
BcaB05g24243 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 54.7 67 43.3
A04p24820 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.7 61 44.3
BraA04t18002Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-06 54.7 79 39.2
BraA10t45106Z Brassica rapa HOM05D000171 ORTHO05D000101 4.9e-06 54.7 69 44.9
C09p71120 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-06 54.3 69 44.9
BraA09t41137Z Brassica rapa HOM05D000171 ORTHO05D000101 6.4e-06 54.3 79 39.2
BraA02t05249Z Brassica rapa HOM05D000171 ORTHO05D000101 8.4e-06 53.9 62 48.4
CARHR220790 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.4e-06 53.9 66 37.9


User provided reference genes

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