Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 3.0e-92 341.7 152 100.0
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 2.4e-73 278.9 126 98.4
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 2.4e-73 278.9 126 98.4
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 2.4e-73 278.9 126 98.4
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 3.1e-73 278.5 126 98.4
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 3.1e-73 278.5 126 98.4
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 4.0e-73 278.1 126 98.4
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 5.8e-72 274.2 126 96.8
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 2.9e-71 271.9 126 96.0
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 8.4e-71 270.4 136 91.2
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 1.4e-70 269.6 126 95.2
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.9e-70 269.2 126 95.2
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 3.2e-70 268.5 126 94.4
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 4.2e-70 268.1 126 93.7
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.8e-65 252.7 126 88.9
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 2.4e-65 252.3 126 90.5
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 2.5e-54 215.7 127 74.8
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 4.2e-54 214.9 127 72.4
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 1.6e-53 213.0 127 72.4
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 4.6e-53 211.5 127 71.7
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 6.1e-53 211.1 127 71.7
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 7.9e-53 210.7 127 69.3
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 7.9e-53 210.7 127 70.9
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.0e-52 210.3 126 72.2
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.4e-52 209.9 127 73.2
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.4e-52 209.9 127 73.2
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.4e-52 209.9 127 73.2
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 1.4e-52 209.9 127 71.7
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 2.3e-52 209.1 127 70.1
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 3.9e-52 208.4 133 67.7
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 3.9e-52 208.4 127 69.3
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 5.1e-52 208.0 127 70.9
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 6.7e-52 207.6 126 70.6
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 1.1e-51 206.8 127 72.4
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 1.1e-51 206.8 127 69.3
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 2.0e-51 206.1 127 70.1
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 2.6e-51 205.7 127 69.3
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 3.3e-51 205.3 127 68.5
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 3.3e-51 205.3 127 70.1
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 3.3e-51 205.3 127 70.9
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 4.4e-51 204.9 127 70.1
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 4.4e-51 204.9 127 70.9
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 7.4e-51 204.1 133 65.4
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 1.3e-50 203.4 133 65.4
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 1.3e-50 203.4 127 69.3
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 1.7e-50 203.0 127 68.5
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 1.7e-50 203.0 127 71.7
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 1.7e-50 203.0 126 69.8
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 2.2e-50 202.6 127 69.3
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 2.2e-50 202.6 127 69.3
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 2.2e-50 202.6 134 67.9
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.8e-50 202.2 127 67.7
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 3.7e-50 201.8 127 70.9
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 4.8e-50 201.4 130 66.9
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 6.3e-50 201.1 95 91.6
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 6.3e-50 201.1 126 68.3
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.1e-49 200.3 127 66.9
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.4e-49 199.9 126 69.0
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.4e-49 199.9 126 69.0
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.4e-49 199.9 127 66.9
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.8e-49 199.5 127 68.5
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 3.1e-49 198.7 127 69.3
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 3.1e-49 198.7 127 67.7
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 4.1e-49 198.4 133 66.2
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 4.1e-49 198.4 127 67.7
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 5.3e-49 198.0 127 66.9
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 5.3e-49 198.0 127 67.7
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 6.9e-49 197.6 127 67.7
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 1.2e-48 196.8 127 66.1
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 1.5e-48 196.4 127 66.9
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 1.5e-48 196.4 127 66.9
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.5e-48 196.4 129 67.4
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 2.0e-48 196.1 126 65.9
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 2.6e-48 195.7 127 67.7
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 3.4e-48 195.3 127 66.9
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 1.0e-47 193.7 127 65.4
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 1.3e-47 193.4 127 66.1
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.7e-47 193.0 151 55.6
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.2e-47 192.6 127 63.8
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 3.8e-47 191.8 127 65.4
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 3.8e-47 191.8 127 65.4
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 5.0e-47 191.4 127 65.4
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 6.5e-47 191.0 127 63.0
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 8.5e-47 190.7 127 63.0
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 8.5e-47 190.7 126 65.1
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 1.1e-46 190.3 126 67.5
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 1.4e-46 189.9 127 66.9
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 1.9e-46 189.5 127 63.0
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 1.9e-46 189.5 127 65.4
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 2.5e-46 189.1 126 64.3
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 2.5e-46 189.1 127 62.2
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 3.2e-46 188.7 127 64.6
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 3.2e-46 188.7 127 63.8
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.2e-45 186.8 127 64.6
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 1.0e-44 183.7 127 62.2
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 2.3e-44 182.6 127 65.4
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 3.0e-44 182.2 127 63.8
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 3.9e-44 181.8 126 64.3
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 6.7e-44 181.0 128 63.3
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 1.1e-43 180.3 127 63.0
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 1.5e-43 179.9 127 63.0
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 2.0e-43 179.5 127 63.0
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 5.7e-43 177.9 127 64.6
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 7.4e-43 177.6 148 56.8
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 1.7e-42 176.4 149 56.4
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 2.2e-42 176.0 127 61.4
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.1e-41 173.7 150 54.0
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 3.1e-41 172.2 163 50.3
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 9.1e-41 170.6 116 65.5
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 1.2e-40 170.2 127 59.8
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.4e-35 151.8 136 50.0
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 9.7e-35 150.6 127 52.0
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 9.7e-35 150.6 127 52.0
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 1.7e-34 149.8 117 59.8
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 2.8e-34 149.1 127 55.1
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 3.7e-34 148.7 97 64.9
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 8.2e-34 147.5 141 48.2
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 7.0e-33 144.4 127 54.3
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 1.0e-31 140.6 85 78.8
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 8.5e-31 137.5 127 48.8
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 2.5e-30 136.0 144 44.4
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.1e-29 132.9 127 49.6
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 2.7e-29 132.5 129 46.5
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.6e-29 132.1 123 52.0
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.4e-28 130.2 127 51.2
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 7.5e-27 124.4 128 46.1
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 7.5e-27 124.4 127 46.5
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 9.8e-27 124.0 112 50.9
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.8e-25 119.8 91 59.3
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.4e-25 119.4 90 60.0
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.7e-24 115.9 91 58.2
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 7.7e-24 114.4 79 62.0
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 3.8e-23 112.1 127 44.1
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 1.1e-22 110.5 93 58.1
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 5.5e-22 108.2 126 39.7
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 9.5e-22 107.5 112 49.1
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 2.3e-20 102.8 129 36.4
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 2.2e-18 96.3 57 66.7
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 2.2e-18 96.3 57 66.7
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 3.7e-18 95.5 57 71.9
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 3.7e-18 95.5 62 66.1
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 4.5e-16 88.6 58 62.1
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 1.7e-15 86.7 60 61.7
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.9e-15 85.9 91 44.0
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 7.3e-14 81.3 63 54.0
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.1e-13 78.2 65 55.4
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.1e-13 78.2 65 55.4
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.0e-12 77.4 68 52.9
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.8e-12 76.6 60 56.7
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 3.0e-12 75.9 117 32.5
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 5.2e-12 75.1 104 37.5
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.4e-11 72.4 60 55.0
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 7.5e-11 71.2 65 52.3
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.7e-10 70.1 65 50.8
COL.COLO4_30599 Corchorus olitorius HOM05D004267 ORTHO05D044750 1.7e-10 70.1 136 34.6
AUR62036408 Chenopodium quinoa HOM05D001707 ORTHO05D001694 9.2e-09 64.3 45 60.0
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 2.3e-07 59.7 86 36.0
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 1.5e-06 57.0 125 32.0


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