Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.3e-73 279.6 146 100.0
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 5.2e-70 267.7 146 97.3
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 2.9e-68 261.9 145 95.9
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 1.8e-62 242.7 146 90.4
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 1.5e-61 239.6 146 89.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 3.4e-53 211.8 147 80.3
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 7.6e-53 210.7 151 80.1
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 1.3e-52 209.9 147 79.6
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.7e-52 209.5 145 81.4
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 2.4e-51 205.7 155 74.8
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 3.2e-51 205.3 152 77.6
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 3.2e-51 205.3 152 77.6
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.0e-49 200.3 160 72.5
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 3.9e-49 198.4 157 73.2
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 1.1e-48 196.8 157 71.3
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.9e-48 196.1 156 70.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 2.9e-44 182.2 152 69.7
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 4.3e-40 168.3 157 63.1
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.4e-35 153.3 125 63.2
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 7.2e-35 151.0 146 58.2
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.2e-34 150.2 121 63.6
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 2.7e-34 149.1 146 57.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.0e-33 147.1 146 56.8
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 3.0e-33 145.6 149 54.4
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 3.0e-33 145.6 157 52.9
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 5.1e-33 144.8 146 52.1
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 6.7e-33 144.4 110 63.6
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 6.7e-33 144.4 153 52.9
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 6.7e-33 144.4 126 58.7
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 8.8e-33 144.1 106 66.0
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 8.8e-33 144.1 149 53.0
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.1e-32 143.7 106 65.1
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 1.5e-32 143.3 151 55.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.5e-32 143.3 110 62.7
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.5e-32 143.3 147 52.4
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.9e-32 142.9 148 54.7
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 3.3e-32 142.1 135 54.8
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 3.3e-32 142.1 126 56.3
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 4.3e-32 141.7 149 51.7
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.3e-32 141.7 126 56.3
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 5.7e-32 141.4 106 65.1
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 5.7e-32 141.4 98 67.3
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 9.7e-32 140.6 115 59.1
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 9.7e-32 140.6 104 65.4
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 9.7e-32 140.6 128 55.5
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 1.3e-31 140.2 131 55.7
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.3e-31 140.2 135 55.6
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.2e-31 139.4 128 55.5
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.7e-31 138.7 146 51.4
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 3.7e-31 138.7 147 51.7
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.7e-31 138.7 102 64.7
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 4.8e-31 138.3 97 63.9
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 6.3e-31 137.9 146 50.7
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 6.3e-31 137.9 146 50.7
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 8.2e-31 137.5 107 64.5
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 8.2e-31 137.5 102 63.7
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.1e-30 137.1 107 59.8
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.1e-30 137.1 133 54.1
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.4e-30 136.7 143 52.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.4e-30 136.7 143 51.7
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 1.4e-30 136.7 128 55.5
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.1e-30 135.6 126 55.6
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 4.1e-30 135.2 137 48.2
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 9.1e-30 134.0 143 51.7
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 9.1e-30 134.0 95 65.3
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.2e-29 133.7 156 48.7
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.0e-29 132.9 98 61.2
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 2.0e-29 132.9 99 65.7
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 3.4e-29 132.1 111 58.6
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 3.4e-29 132.1 98 66.3
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.5e-29 131.7 150 50.0
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 5.9e-29 131.3 153 51.6
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 5.9e-29 131.3 145 49.7
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 7.7e-29 131.0 94 66.0
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 7.7e-29 131.0 98 61.2
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.0e-28 130.6 152 48.7
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.3e-28 130.2 150 50.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.3e-28 130.2 107 62.6
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 2.2e-28 129.4 128 56.2
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 2.2e-28 129.4 107 61.7
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 2.9e-28 129.0 120 55.8
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 6.5e-28 127.9 93 64.5
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 8.5e-28 127.5 107 58.9
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.9e-27 126.3 128 53.9
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.9e-27 126.3 107 60.7
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.5e-27 125.9 129 53.5
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 3.2e-27 125.6 107 60.7
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.5e-27 124.8 115 55.7
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.5e-27 124.8 107 57.9
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 5.5e-27 124.8 153 49.0
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 7.2e-27 124.4 107 59.8
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 9.4e-27 124.0 114 57.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 3.6e-26 122.1 107 57.9
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 4.7e-26 121.7 152 47.4
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 7.9e-26 120.9 97 60.8
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 2.3e-25 119.4 173 43.4
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 5.1e-25 118.2 141 47.5
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 8.8e-25 117.5 98 55.1
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.5e-24 116.7 107 55.1
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.7e-23 112.1 128 50.0
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 6.3e-23 111.3 99 51.5
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.1e-22 110.5 165 38.8
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 1.2e-21 107.1 74 67.6
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.0e-20 104.0 138 42.8
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 8.5e-20 100.9 80 61.2
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.1e-19 100.5 98 54.1
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.2e-18 97.1 99 54.5
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 2.3e-17 92.8 207 33.3
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 3.9e-17 92.0 107 44.9
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 5.7e-16 88.2 58 72.4
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 9.7e-16 87.4 61 59.0
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 8.2e-15 84.3 97 44.3
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.4e-14 82.8 105 40.0
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 3.1e-14 82.4 67 64.2
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 3.1e-14 82.4 106 50.9
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.2e-13 80.5 93 45.2
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 4.5e-13 78.6 116 37.9
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.5e-11 72.8 97 49.5
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.2e-08 63.9 96 35.4
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 2.8e-07 59.3 96 33.3
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 8.2e-07 57.8 42 52.4


User provided reference genes

Program Settings