Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02099 Brassica carinata HOM05D004253 ORTHO05D005013 9.8e-80 300.1 150 100.0
BolC7t44561H Brassica oleracea HOM05D004253 ORTHO05D005013 1.2e-64 250.0 128 97.7
C07p40260 Brassica napus HOM05D004253 ORTHO05D005013 1.5e-64 249.6 130 96.2
BcaB02g09172 Brassica carinata HOM05D004253 ORTHO05D005013 2.1e-61 239.2 130 92.3
A05p07590 Brassica napus HOM05D004253 ORTHO05D005013 2.1e-61 239.2 130 90.8
BraA05t19726Z Brassica rapa HOM05D004253 ORTHO05D005013 2.1e-61 239.2 130 90.8
C04p09070 Brassica napus HOM05D004253 ORTHO05D005013 4.6e-61 238.0 130 90.0
CARHR133140 Cardamine hirsuta HOM05D004253 ORTHO05D005013 7.8e-61 237.3 130 90.0
BcaC02g11997 Brassica carinata HOM05D004253 ORTHO05D005013 1.7e-60 236.1 143 81.8
Thhalv10016525m.g Eutrema salsugineum HOM05D004253 ORTHO05D005013 3.9e-60 235.0 127 90.6
Carub.0004s2043 Capsella rubella HOM05D004253 ORTHO05D005013 6.6e-60 234.2 128 89.1
AL4G35730 Arabidopsis lyrata HOM05D004253 ORTHO05D005013 2.5e-59 232.3 130 87.7
AT2G38460 Arabidopsis thaliana HOM05D004253 ORTHO05D005013 5.6e-59 231.1 130 87.7
Sp4g20780 Schrenkiella parvula HOM05D004253 ORTHO05D005013 9.5e-59 230.3 127 90.6
BcaB01g05801 Brassica carinata HOM05D004253 ORTHO05D005013 3.2e-54 215.3 125 84.0
BolC3t12713H Brassica oleracea HOM05D004253 ORTHO05D005013 3.2e-54 215.3 125 84.0
AT5G03570 Arabidopsis thaliana HOM05D004253 ORTHO05D005013 5.4e-54 214.5 125 82.4
BcaB01g05813 Brassica carinata HOM05D004253 ORTHO05D005013 5.4e-54 214.5 125 83.2
Aa31LG1G21620 Aethionema arabicum HOM05D004253 ORTHO05D005013 1.2e-53 213.4 125 81.6
A03p01250 Brassica napus HOM05D004253 ORTHO05D005013 1.6e-53 213.0 125 81.6
BraA03t09505Z Brassica rapa HOM05D004253 ORTHO05D005013 1.6e-53 213.0 125 81.6
Carub.0006s0241 Capsella rubella HOM05D004253 ORTHO05D005013 2.1e-53 212.6 125 82.4
C03p01610 Brassica napus HOM05D004253 ORTHO05D005013 1.7e-52 209.5 125 81.6
AL6G13070 Arabidopsis lyrata HOM05D004253 ORTHO05D005013 3.0e-52 208.8 125 80.0
Aa31sc114G20 Aethionema arabicum HOM05D004253 ORTHO05D005013 3.9e-52 208.4 122 84.4
Sp6g39180 Schrenkiella parvula HOM05D004253 ORTHO05D005013 6.6e-52 207.6 127 79.5
CARHR209750 Cardamine hirsuta HOM05D004253 ORTHO05D005013 5.6e-51 204.5 122 81.1
Thhalv10013299m.g Eutrema salsugineum HOM05D004253 ORTHO05D005013 2.1e-50 202.6 125 80.0
THA.LOC104806636 Tarenaya hassleriana HOM05D004253 ORTHO05D005013 2.8e-50 202.2 122 80.3
Dinv25280 Davidia involucrata HOM05D004253 ORTHO05D005013 9.9e-48 193.7 125 72.8
COL.COLO4_14437 Corchorus olitorius HOM05D004253 ORTHO05D005013 1.4e-46 189.9 124 69.4
Eucgr.A00632 Eucalyptus grandis HOM05D004253 ORTHO05D005013 1.4e-46 189.9 142 66.2
Hund19850 Selenicereus undatus HOM05D004253 ORTHO05D005013 2.4e-46 189.1 122 72.1
MD12G1181400 Malus domestica HOM05D004253 ORTHO05D005013 3.2e-46 188.7 127 68.5
Oeu026968.1 Olea europaea HOM05D004253 ORTHO05D005013 5.4e-46 188.0 134 65.7
TWI53G0484 Tripterygium wilfordii HOM05D004253 ORTHO05D005013 7.1e-46 187.6 133 63.9
Cfa017100 Carpinus fangiana HOM05D004253 ORTHO05D005013 1.6e-45 186.4 122 73.0
TWI74G0689 Tripterygium wilfordii HOM05D004253 ORTHO05D005013 2.1e-45 186.0 133 66.2
Cc06_g00690 Coffea canephora HOM05D004253 ORTHO05D005013 2.7e-45 185.7 132 66.7
Eucgr.A00629 Eucalyptus grandis HOM05D004253 ORTHO05D005013 2.7e-45 185.7 139 65.5
Potri.016G128600 Populus trichocarpa HOM05D004253 ORTHO05D005013 2.7e-45 185.7 127 66.9
MSTRG.18968 Avicennia marina HOM05D004253 ORTHO05D005013 3.5e-45 185.3 129 65.9
ClCG04G006590 Citrullus lanatus HOM05D004253 ORTHO05D005013 3.5e-45 185.3 122 70.5
CsaV3_4G026660 Cucumis sativus L. HOM05D004253 ORTHO05D005013 4.6e-45 184.9 122 68.9
Manes.09G113100 Manihot esculenta HOM05D004253 ORTHO05D005013 4.6e-45 184.9 122 69.7
Hma1.2p1_0501F.1_g167250 Hydrangea macrophylla HOM05D004253 ORTHO05D005013 6.0e-45 184.5 121 70.2
Prupe.6G286200 Prunus persica HOM05D004253 ORTHO05D005013 6.0e-45 184.5 127 66.9
Sed0023395 Sechium edule HOM05D004253 ORTHO05D005013 6.0e-45 184.5 122 68.9
Haze_21100 Corylus avellana HOM05D004253 ORTHO05D005013 7.8e-45 184.1 122 72.1
PGR031G1936 Punica granatum HOM05D004253 ORTHO05D005013 7.8e-45 184.1 122 71.3
Lsat_1_v5_gn_9_37021 Lactuca sativa HOM05D004253 ORTHO05D005013 1.0e-44 183.7 128 64.1
Nitab4.5_0012987g0010 Nicotiana tabacum HOM05D004253 ORTHO05D005013 1.3e-44 183.3 127 66.9
Sed0018512 Sechium edule HOM05D004253 ORTHO05D005013 1.7e-44 183.0 122 69.7
Thecc.05G005200 Theobroma cacao HOM05D004253 ORTHO05D005013 1.7e-44 183.0 127 64.6
Cpa.g.sc5.254 Carica papaya HOM05D004253 ORTHO05D005013 2.3e-44 182.6 122 69.7
Solyc10g076280.3 Solanum lycopersicum HOM05D004253 ORTHO05D005013 2.3e-44 182.6 129 66.7
Duzib177G0173 Durio zibethinus HOM05D004253 ORTHO05D005013 3.9e-44 181.8 127 69.3
FvH4_6g10490 Fragaria vesca HOM05D004253 ORTHO05D005013 3.9e-44 181.8 127 65.4
FAN05G1507 Fragaria x ananassa HOM05D004253 ORTHO05D005013 3.9e-44 181.8 127 66.9
Ciclev10011564m.g Citrus clementina HOM05D004253 ORTHO05D005013 5.1e-44 181.4 122 68.9
ECA247G0592 Erigeron canadensis HOM05D004253 ORTHO05D005013 5.1e-44 181.4 124 66.1
Migut.J00086 Erythranthe guttata HOM05D004253 ORTHO05D005013 5.1e-44 181.4 127 65.4
FAN05G3841 Fragaria x ananassa HOM05D004253 ORTHO05D005013 5.1e-44 181.4 127 66.9
RcHm_v2.0_Chr3g0461441 Rosa chinensis HOM05D004253 ORTHO05D005013 5.1e-44 181.4 131 64.1
Sopen10g027900 Solanum pennellii HOM05D004253 ORTHO05D005013 5.1e-44 181.4 129 65.9
AUR62026347 Chenopodium quinoa HOM05D004253 ORTHO05D005013 6.6e-44 181.0 122 68.0
FAN14G5304 Fragaria x ananassa HOM05D004253 ORTHO05D005013 6.6e-44 181.0 127 65.4
FAN09G3783 Fragaria x ananassa HOM05D004253 ORTHO05D005013 8.7e-44 180.6 127 66.1
Atru.chr8.2352 Acer truncatum HOM05D004253 ORTHO05D005013 1.1e-43 180.3 122 69.7
DCAR_023991 Daucus carota HOM05D004253 ORTHO05D005013 1.1e-43 180.3 133 63.2
HanXRQChr10g0287841 Helianthus annuus HOM05D004253 ORTHO05D005013 1.1e-43 180.3 122 67.2
Nitab4.5_0000355g0170 Nicotiana tabacum HOM05D004253 ORTHO05D005013 1.1e-43 180.3 127 66.1
CSS0015068 Camellia sinensis var. sinensis HOM05D004253 ORTHO05D005013 1.9e-43 179.5 125 66.4
FAN02G2747 Fragaria x ananassa HOM05D004253 ORTHO05D005013 2.5e-43 179.1 128 64.8
Gohir.A01G170500 Gossypium hirsutum HOM05D004253 ORTHO05D005013 2.5e-43 179.1 126 64.3
RcHm_v2.0_Chr3g0461451 Rosa chinensis HOM05D004253 ORTHO05D005013 2.5e-43 179.1 125 64.8
Sabra16G0129900 Salix brachista HOM05D004253 ORTHO05D005013 2.5e-43 179.1 127 63.8
Nn2g13286 Nelumbo nucifera HOM05D004253 ORTHO05D005013 4.3e-43 178.3 120 70.0
TAR633G0963 Trochodendron aralioides HOM05D004253 ORTHO05D005013 4.3e-43 178.3 126 68.3
COL.COLO4_17446 Corchorus olitorius HOM05D004253 ORTHO05D005013 5.6e-43 177.9 126 67.5
Peaxi162Scf00264g00861 Petunia axillaris HOM05D004253 ORTHO05D005013 5.6e-43 177.9 127 66.9
Eucgr.A00634 Eucalyptus grandis HOM05D004253 ORTHO05D005013 7.3e-43 177.6 125 68.0
Gorai.002G200200 Gossypium raimondii HOM05D004253 ORTHO05D005013 7.3e-43 177.6 126 64.3
RcHm_v2.0_Chr6g0247161 Rosa chinensis HOM05D004253 ORTHO05D005013 7.3e-43 177.6 127 66.1
PGSC0003DMG400011865 Solanum tuberosum HOM05D004253 ORTHO05D005013 7.3e-43 177.6 121 69.4
Rhsim05G0226800 Rhododendron simsii HOM05D004253 ORTHO05D005013 1.3e-42 176.8 132 64.4
Sc02g0000650 Simmondsia chinensis HOM05D004253 ORTHO05D005013 1.3e-42 176.8 120 67.5
GSVIVG01030252001 Vitis vinifera HOM05D004253 ORTHO05D005013 1.3e-42 176.8 122 68.9
Actinidia29061 Actinidia chinensis HOM05D004253 ORTHO05D005013 1.6e-42 176.4 120 70.0
EL10Ac7g16784 Beta vulgaris HOM05D004253 ORTHO05D005013 2.1e-42 176.0 134 64.2
EL10As8g23831 Beta vulgaris HOM05D004253 ORTHO05D005013 2.1e-42 176.0 134 64.2
Gohir.D01G161500 Gossypium hirsutum HOM05D004253 ORTHO05D005013 2.1e-42 176.0 126 63.5
CSS0016892 Camellia sinensis var. sinensis HOM05D004253 ORTHO05D005013 3.6e-42 175.3 125 67.2
CANSAT35G1695 Cannabis sativa HOM05D004253 ORTHO05D005013 3.6e-42 175.3 134 66.4
GSVIVG01030250001 Vitis vinifera HOM05D004253 ORTHO05D005013 3.6e-42 175.3 122 66.4
Aqoxy4G02184 Aquilegia oxysepala HOM05D004253 ORTHO05D005013 8.1e-42 174.1 120 64.2
QL07p033645 Quercus lobata HOM05D004253 ORTHO05D005013 8.1e-42 174.1 120 69.2
Eucgr.A00630 Eucalyptus grandis HOM05D004253 ORTHO05D005013 1.1e-41 173.7 123 68.3
CAN.G955.1 Capsicum annuum HOM05D004253 ORTHO05D005013 1.8e-41 172.9 119 66.4
SGA_v2.0_scaffold85G26671 Striga asiatica HOM05D004253 ORTHO05D005013 1.8e-41 172.9 129 62.8
VMungo0331G0711 Vigna mungo HOM05D004253 ORTHO05D005013 1.8e-41 172.9 122 62.3
CiPaw.09G216200 Carya illinoinensis HOM05D004253 ORTHO05D005013 3.1e-41 172.2 127 66.1
CiPaw.09G216400 Carya illinoinensis HOM05D004253 ORTHO05D005013 4.0e-41 171.8 126 65.9
MBI15_g03641_MAGBIO Magnolia biondii HOM05D004253 ORTHO05D005013 4.0e-41 171.8 120 66.7
HanXRQChr15g0463391 Helianthus annuus HOM05D004253 ORTHO05D005013 1.5e-40 169.9 122 63.1
Glyma.03G042400 Glycine max HOM05D004253 ORTHO05D005013 2.0e-40 169.5 122 62.3
Lj3g0025170 Lotus japonicus HOM05D004253 ORTHO05D005013 4.5e-40 168.3 133 56.4
Lalb_Chr13g0291391 Lupinus albus HOM05D004253 ORTHO05D005013 7.6e-40 167.5 122 62.3
CDE04G3038 Ceratophyllum demersum HOM05D004253 ORTHO05D005013 1.3e-39 166.8 120 66.7
Lj3g0027471 Lotus japonicus HOM05D004253 ORTHO05D005013 1.7e-39 166.4 125 63.2
Glyma.01G128300 Glycine max HOM05D004253 ORTHO05D005013 2.9e-39 165.6 122 62.3
Lj3C944T3 Lonicera japonica HOM05D004253 ORTHO05D005013 3.8e-39 165.2 134 62.7
Medtr4g013240 Medicago truncatula HOM05D004253 ORTHO05D005013 4.9e-39 164.9 122 59.8
PSO349G0244 Papaver somniferum HOM05D004253 ORTHO05D005013 4.9e-39 164.9 120 61.7
Psat7g249920 Pisum sativum HOM05D004253 ORTHO05D005013 4.9e-39 164.9 122 59.8
SEGI_11914 Sequoiadendron giganteum HOM05D004253 ORTHO05D005013 6.4e-39 164.5 124 59.7
VMungo0331G0982 Vigna mungo HOM05D004253 ORTHO05D005013 1.9e-38 162.9 122 59.0
Zm00001eb384340 Zea mays HOM05D004253 ORTHO05D005013 3.2e-38 162.2 120 63.3
Eucgr.A00635 Eucalyptus grandis HOM05D004253 ORTHO05D005013 1.2e-37 160.2 132 57.6
arahy.Tifrunner.gnm1.ann1.ASGW3G Arachis hypogaea HOM05D004253 ORTHO05D005013 7.9e-37 157.5 149 53.0
Os06g0560000 Oryza sativa ssp. japonica HOM05D004253 ORTHO05D005013 1.8e-36 156.4 122 62.3
Lj3g0011406 Lotus japonicus HOM05D004253 ORTHO05D005013 6.7e-36 154.5 122 58.2
HPP92_012007 Vanilla planifolia HOM05D004253 ORTHO05D005013 1.9e-35 152.9 120 58.3
PSO017G1341 Papaver somniferum HOM05D004253 ORTHO05D005013 1.4e-33 146.7 114 58.8
PSO349G0271 Papaver somniferum HOM05D004253 ORTHO05D005013 1.4e-33 146.7 114 57.9
Phvul.010G062300 Phaseolus vulgaris HOM05D004253 ORTHO05D005013 5.3e-33 144.8 110 59.1
Medtr4g013245 Medicago truncatula HOM05D004253 ORTHO05D005013 9.0e-33 144.1 156 46.2
Thecc.05G005300 Theobroma cacao HOM05D004253 ORTHO05D005013 9.9e-32 140.6 86 73.3
SMO115G0243 Selaginella moellendorffii HOM05D004253 ORTHO05D005013 3.8e-31 138.7 120 52.5
vmacro20334 Vaccinium macrocarpon HOM05D004253 ORTHO05D005013 8.4e-31 137.5 85 76.5
Pp3c20_5190 Physcomitrium patens HOM05D004253 ORTHO05D005013 2.4e-30 136.0 120 50.8
AUR62006302 Chenopodium quinoa HOM05D004253 ORTHO05D005013 3.2e-30 135.6 85 74.1
Zm00001eb384360 Zea mays HOM05D004253 ORTHO05D005013 3.2e-30 135.6 111 56.8
Cc00_g33920 Coffea canephora HOM05D004253 ORTHO05D005013 7.1e-30 134.4 85 75.3
Nn5g27904 Nelumbo nucifera HOM05D004253 ORTHO05D005013 9.3e-30 134.0 84 75.0
EL10Ac7g17016 Beta vulgaris HOM05D004253 ORTHO05D005013 2.7e-29 132.5 95 69.5
MELO3C026034.2 Cucumis melo HOM05D004253 ORTHO05D005013 3.5e-29 132.1 85 69.4
Glyma.03G042500 Glycine max HOM05D004253 ORTHO05D005013 7.9e-29 131.0 106 60.4
ATR0594G059 Amborella trichopoda HOM05D004253 ORTHO05D005013 1.5e-27 126.7 83 68.7
Manes.09G113000 Manihot esculenta HOM05D004253 ORTHO05D005013 4.3e-27 125.2 105 58.1
Phvul.010G062200 Phaseolus vulgaris HOM05D004253 ORTHO05D005013 1.1e-25 120.6 85 61.2
Mapoly0049s0027 Marchantia polymorpha HOM05D004253 ORTHO05D005013 1.8e-25 119.8 120 51.7
Ca_27544_v3 Cicer arietinum L. HOM05D004253 ORTHO05D005013 4.0e-25 118.6 85 62.4
Duzib093G0769 Durio zibethinus HOM05D004253 ORTHO05D005013 4.5e-24 115.2 103 56.3
HPP92_012012 Vanilla planifolia HOM05D004253 ORTHO05D005013 4.5e-24 115.2 83 61.4
arahy.Tifrunner.gnm1.ann1.E0KVE0 Arachis hypogaea HOM05D004253 ORTHO05D005013 4.2e-22 108.6 103 51.5
TPR.G5208 Trifolium pratense HOM05D004253 ORTHO05D005013 1.8e-20 103.2 99 50.5
CBR_g42060 Chara braunii HOM05D004253 ORTHO05D005013 3.9e-20 102.1 97 49.5
SMO118G0042 Selaginella moellendorffii HOM05D004253 ORTHO05D005013 1.1e-19 100.5 113 42.5
TPR.G5249 Trifolium pratense HOM05D004253 ORTHO05D005013 5.3e-17 91.7 65 58.5
unitig_8.g4466 Utricularia gibba HOM05D004253 ORTHO05D005013 6.5e-15 84.7 66 59.1
AagrBONN_evm.TU.Sc2ySwM_344.1348 Anthoceros agrestis HOM05D004253 ORTHO05D005013 1.4e-14 83.6 117 38.5
SalBow5G5570 Salvia bowleyana HOM05D004253 ORTHO05D005013 1.4e-09 67.0 48 60.4
MSTRG.18966 Avicennia marina HOM05D004253 ORTHO05D005013 6.9e-09 64.7 42 69.0
PSO266G0027 Papaver somniferum HOM05D004253 ORTHO05D005013 5.9e-08 61.6 44 70.5
Cre16.g687000 Chlamydomonas reinhardtii HOM05D004253 ORTHO05D005013 1.3e-07 60.5 86 37.2
BraA05t19727Z Brassica rapa HOM05D004253 ORTHO05D108119 9.4e-06 54.3 45 60.0


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