Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02085 Brassica carinata HOM05D012092 ORTHO05D001581 8.7e-41 169.9 85 100.0
C07p62600 Brassica napus HOM05D012092 ORTHO05D001581 8.7e-41 169.9 85 100.0
BolC7t46675H Brassica oleracea HOM05D012092 ORTHO05D001581 8.7e-41 169.9 85 100.0
A03p65500 Brassica napus HOM05D012092 ORTHO05D001581 1.6e-39 165.6 85 97.6
BraA03t15602Z Brassica rapa HOM05D012092 ORTHO05D001581 1.6e-39 165.6 85 97.6
Sp7g35370 Schrenkiella parvula HOM05D012092 ORTHO05D001581 9.0e-30 133.3 81 82.7
BcaC06g33373 Brassica carinata HOM05D012092 ORTHO05D001581 1.6e-26 122.5 77 83.1
AT4G37720 Arabidopsis thaliana HOM05D012092 ORTHO05D001581 4.6e-26 120.9 84 72.6
A08p22740 Brassica napus HOM05D012092 ORTHO05D001581 1.0e-25 119.8 81 76.5
BraA08t34243Z Brassica rapa HOM05D012092 ORTHO05D001581 1.0e-25 119.8 81 76.5
BcaB03g12333 Brassica carinata HOM05D012092 ORTHO05D001581 5.1e-25 117.5 81 77.8
CARHR246110 Cardamine hirsuta HOM05D012092 ORTHO05D001581 2.5e-24 115.2 81 74.1
Thhalv10026843m.g Eutrema salsugineum HOM05D012092 ORTHO05D001581 6.2e-23 110.5 81 74.1
Carub.0007s0253 Capsella rubella HOM05D012092 ORTHO05D001581 2.6e-21 105.1 82 69.5
AL7G12960 Arabidopsis lyrata HOM05D012092 ORTHO05D001581 3.4e-21 104.8 62 79.0
Sp4g01910 Schrenkiella parvula HOM05D001756 ORTHO05D001581 1.9e-11 72.4 82 52.4
AL4G12440 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 9.4e-11 70.1 82 53.7
BcaB06g27846 Brassica carinata HOM05D001756 ORTHO05D001581 9.4e-11 70.1 81 51.9
Carub.0004s0199 Capsella rubella HOM05D001756 ORTHO05D001581 1.6e-10 69.3 81 50.6
A04p17430 Brassica napus HOM05D001756 ORTHO05D001581 2.1e-10 68.9 81 51.9
BraA04t17366Z Brassica rapa HOM05D001756 ORTHO05D001581 2.1e-10 68.9 81 51.9
BcaC02g08589 Brassica carinata HOM05D001756 ORTHO05D001581 2.7e-10 68.6 81 50.6
C04p52190 Brassica napus HOM05D001756 ORTHO05D001581 2.7e-10 68.6 81 50.6
BolC4t26796H Brassica oleracea HOM05D001756 ORTHO05D001581 2.7e-10 68.6 81 50.6
CARHR114180 Cardamine hirsuta HOM05D001756 ORTHO05D001581 1.4e-09 66.2 82 48.8
THA.LOC104804198 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 3.0e-09 65.1 81 51.9
AT2G22860 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 3.9e-09 64.7 84 52.4
Thhalv10000381m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 3.9e-09 64.7 83 51.8
CARHR114170 Cardamine hirsuta HOM05D001756 ORTHO05D001581 6.7e-09 63.9 82 47.6
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 1.5e-08 62.8 81 43.2
THA.LOC104819883 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 5.7e-08 60.8 85 47.1
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 3.7e-07 58.2 81 48.1
TWI74G0998 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.7e-07 58.2 83 44.6
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 8.2e-07 57.0 81 45.7
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.1e-06 56.6 81 46.9
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 1.1e-06 56.6 81 43.2
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.4e-06 56.2 82 45.1
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 1.8e-06 55.8 74 47.3
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 1.8e-06 55.8 78 46.2
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.4e-06 55.5 81 46.9
CiPaw.01G002400 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.4e-06 55.5 77 46.8
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.4e-06 55.5 81 44.4
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 3.1e-06 55.1 78 43.6
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.1e-06 54.7 81 45.7
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.3e-06 54.3 81 43.2
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 5.3e-06 54.3 82 45.1
CAN.G1343.2 Capsicum annuum HOM05D001756 ORTHO05D001581 6.9e-06 53.9 77 46.8
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 6.9e-06 53.9 81 44.4
MD02G1189200 Malus domestica HOM05D001756 ORTHO05D001581 6.9e-06 53.9 79 43.0
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 6.9e-06 53.9 78 42.3
EL10Ac6g15597 Beta vulgaris HOM05D001756 ORTHO05D001581 9.1e-06 53.5 81 38.3
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.1e-06 53.5 81 45.7
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 9.1e-06 53.5 78 43.6


User provided reference genes

Program Settings