Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 9.4e-80 300.1 144 100.0
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 9.4e-80 300.1 144 100.0
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 9.4e-80 300.1 144 100.0
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 5.7e-69 264.2 149 89.9
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 5.7e-69 264.2 149 89.9
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 4.8e-68 261.2 150 87.3
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 8.3e-68 260.4 149 86.6
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 8.3e-68 260.4 149 86.6
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 8.3e-68 260.4 149 86.6
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 4.1e-67 258.1 149 85.9
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 5.4e-67 257.7 149 85.9
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 6.8e-62 240.7 149 81.9
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.2e-61 240.0 147 83.7
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.5e-61 239.6 151 82.1
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 1.5e-61 239.6 151 82.1
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 6.3e-60 234.2 150 81.3
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 8.3e-60 233.8 151 80.1
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 8.3e-60 233.8 149 81.2
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 3.1e-59 231.9 149 80.5
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 2.9e-57 225.3 148 77.0
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 1.1e-56 223.4 148 78.4
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 1.5e-56 223.0 148 77.0
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 4.3e-56 221.5 149 76.5
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 1.6e-55 219.5 148 73.0
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 2.8e-55 218.8 148 76.4
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 4.7e-55 218.0 149 78.5
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 4.7e-55 218.0 149 78.5
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 6.1e-55 217.6 147 76.2
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 1.8e-54 216.1 147 70.7
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 1.8e-54 216.1 148 76.4
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 3.0e-54 215.3 148 71.6
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 4.0e-54 214.9 148 73.6
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 6.8e-54 214.2 148 70.9
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 8.9e-54 213.8 149 75.2
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 1.5e-53 213.0 149 77.9
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 1.5e-53 213.0 149 77.9
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 3.4e-53 211.8 149 69.1
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 4.4e-53 211.5 148 70.9
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 7.5e-53 210.7 149 70.5
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 9.8e-53 210.3 149 70.5
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 2.2e-52 209.1 148 70.9
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 3.7e-52 208.4 148 69.6
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 3.7e-52 208.4 148 69.6
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 3.7e-52 208.4 145 71.7
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 4.9e-52 208.0 148 70.3
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 4.9e-52 208.0 148 68.2
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 8.3e-52 207.2 146 69.2
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.1e-51 206.8 149 73.2
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 1.1e-51 206.8 148 70.3
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 1.8e-51 206.1 148 70.3
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 4.1e-51 204.9 148 68.9
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 4.1e-51 204.9 149 67.8
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 5.4e-51 204.5 148 69.6
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 5.4e-51 204.5 148 69.6
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 5.4e-51 204.5 150 67.3
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 7.0e-51 204.1 148 70.3
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 7.0e-51 204.1 148 68.2
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 9.2e-51 203.8 148 68.2
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 9.2e-51 203.8 148 67.6
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 1.2e-50 203.4 148 68.9
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 1.2e-50 203.4 148 68.9
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 1.6e-50 203.0 148 67.6
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 1.6e-50 203.0 148 67.6
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 2.0e-50 202.6 151 68.9
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 3.5e-50 201.8 148 65.5
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 3.5e-50 201.8 148 66.9
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 7.8e-50 200.7 148 68.2
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 7.8e-50 200.7 148 68.2
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 1.0e-49 200.3 148 66.2
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 1.3e-49 199.9 148 66.2
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 1.3e-49 199.9 148 68.2
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 1.7e-49 199.5 148 68.2
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 1.7e-49 199.5 148 66.9
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 1.7e-49 199.5 148 69.6
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 1.7e-49 199.5 148 67.6
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 2.3e-49 199.1 148 66.9
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 2.3e-49 199.1 148 68.2
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 3.0e-49 198.7 148 66.2
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 3.0e-49 198.7 148 66.2
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 3.9e-49 198.4 148 66.9
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 8.6e-49 197.2 148 65.5
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 8.6e-49 197.2 149 67.1
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 8.6e-49 197.2 149 67.1
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 8.6e-49 197.2 148 64.9
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 1.1e-48 196.8 151 67.5
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 1.1e-48 196.8 135 71.9
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 1.5e-48 196.4 133 76.7
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 1.5e-48 196.4 148 67.6
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 1.5e-48 196.4 149 67.1
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 1.5e-48 196.4 148 67.6
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 2.5e-48 195.7 145 66.9
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.5e-48 195.7 148 67.6
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 3.3e-48 195.3 148 66.2
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 4.3e-48 194.9 148 65.5
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 4.3e-48 194.9 148 64.2
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 5.6e-48 194.5 150 66.7
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 5.6e-48 194.5 148 65.5
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 7.3e-48 194.1 153 62.7
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 7.3e-48 194.1 148 64.9
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 9.5e-48 193.7 148 65.5
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 9.5e-48 193.7 148 66.9
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.6e-47 193.0 149 63.8
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 1.6e-47 193.0 148 65.5
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 1.6e-47 193.0 146 63.7
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 1.6e-47 193.0 148 63.5
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 1.6e-47 193.0 148 64.9
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 1.6e-47 193.0 148 64.9
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 1.6e-47 193.0 148 64.9
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 2.1e-47 192.6 140 72.1
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 2.1e-47 192.6 148 64.9
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 2.1e-47 192.6 149 67.8
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 2.8e-47 192.2 148 64.9
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 3.6e-47 191.8 149 63.1
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 4.7e-47 191.4 148 63.5
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 4.7e-47 191.4 148 64.9
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 4.7e-47 191.4 148 64.9
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 6.2e-47 191.0 148 64.9
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 6.2e-47 191.0 148 64.9
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 8.0e-47 190.7 148 64.9
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 8.0e-47 190.7 142 68.3
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 1.1e-46 190.3 148 64.2
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 1.1e-46 190.3 148 66.2
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 1.4e-46 189.9 150 65.3
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.4e-46 189.9 133 71.4
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 1.4e-46 189.9 133 71.4
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 1.4e-46 189.9 148 63.5
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 1.5e-45 186.4 148 64.2
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 2.0e-45 186.0 148 64.2
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 3.4e-45 185.3 133 69.9
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 4.4e-45 184.9 148 63.5
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 1.7e-44 183.0 137 68.6
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 4.9e-44 181.4 132 69.7
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 8.3e-44 180.6 138 65.2
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 1.4e-43 179.9 148 60.1
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 9.2e-43 177.2 148 63.5
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 3.5e-42 175.3 134 69.4
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 6.0e-42 174.5 127 69.3
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 1.7e-41 172.9 148 62.8
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 3.0e-41 172.2 148 58.8
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 6.6e-41 171.0 117 70.9
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 5.6e-40 167.9 115 68.7
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 7.5e-37 157.5 126 61.9
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 2.9e-36 155.6 103 78.6
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 3.5e-34 148.7 144 56.2
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 7.3e-32 141.0 103 68.0
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 3.6e-31 138.7 150 51.3
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 2.4e-30 136.0 135 52.6
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 5.2e-30 134.8 98 68.4
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 2.6e-29 132.5 147 52.4
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 8.4e-28 127.5 148 50.0
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 8.1e-23 110.9 141 44.7
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 9.0e-22 107.5 125 50.4
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 2.7e-18 95.9 86 51.2
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 1.2e-13 80.5 69 63.8
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 2.2e-12 76.3 77 54.5
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 1.5e-08 63.5 87 37.9


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