Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01909 Brassica carinata HOM05D008824 ORTHO05D003125 7.7e-77 290.4 148 100.0
BcaNung01911 Brassica carinata HOM05D008824 ORTHO05D003125 7.7e-77 290.4 148 100.0
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 1.7e-63 246.1 153 81.7
BraA02t05065Z Brassica rapa HOM05D008824 ORTHO05D003125 2.8e-63 245.4 149 86.6
Sp6g32430 Schrenkiella parvula HOM05D008824 ORTHO05D003125 1.2e-61 240.0 150 85.3
A03p04850 Brassica napus HOM05D008824 ORTHO05D003125 1.3e-60 236.5 150 80.7
BraA03t09824Z Brassica rapa HOM05D008824 ORTHO05D003125 1.3e-60 236.5 150 80.7
BcaB01g05491 Brassica carinata HOM05D008824 ORTHO05D003125 2.2e-60 235.7 151 82.1
BolC3t13066H Brassica oleracea HOM05D008824 ORTHO05D003125 2.2e-60 235.7 151 82.1
BcaB01g06316 Brassica carinata HOM05D008824 ORTHO05D003125 4.2e-59 231.5 151 81.5
BcaNung07098 Brassica carinata HOM05D008824 ORTHO05D003125 2.7e-58 228.8 152 83.6
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 6.1e-58 227.6 150 84.0
C03p05580 Brassica napus HOM05D008824 ORTHO05D003125 8.0e-58 227.3 150 81.3
BcaC04g19263 Brassica carinata HOM05D008824 ORTHO05D003125 1.4e-57 226.5 151 84.8
BolC9t59401H Brassica oleracea HOM05D008824 ORTHO05D003125 1.4e-57 226.5 151 84.8
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 3.0e-57 225.3 152 75.0
A10p26630 Brassica napus HOM05D008824 ORTHO05D003125 1.5e-56 223.0 151 83.4
C09p65790 Brassica napus HOM05D008824 ORTHO05D003125 1.5e-56 223.0 151 83.4
AT5G11070 Arabidopsis thaliana HOM05D008824 ORTHO05D003125 2.0e-56 222.6 158 73.4
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 2.6e-56 222.2 154 76.0
CARHR202220 Cardamine hirsuta HOM05D008824 ORTHO05D003125 3.7e-55 218.4 159 76.7
Carub.0006s0958 Capsella rubella HOM05D008824 ORTHO05D003125 7.7e-53 210.7 165 73.9
BcaC03g13348 Brassica carinata HOM05D008824 ORTHO05D003125 2.6e-48 195.7 132 80.3
C02p04840 Brassica napus HOM05D008824 ORTHO05D003125 2.6e-48 195.7 132 80.3
A02p00820 Brassica napus HOM05D008824 ORTHO05D003125 4.4e-48 194.9 121 86.0
BolC2t06442H Brassica oleracea HOM05D008824 ORTHO05D003125 8.3e-47 190.7 132 78.0
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 2.6e-40 169.1 148 64.9
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 3.4e-40 168.7 147 63.3
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 5.8e-16 88.2 135 45.9
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 7.5e-16 87.8 135 47.4
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 7.1e-14 81.3 147 42.2
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 2.7e-13 79.3 148 36.5
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 3.5e-13 79.0 146 39.0
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 1.9e-11 73.2 127 41.7
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 7.3e-11 71.2 125 41.6
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 1.2e-10 70.5 139 35.3
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 3.6e-10 68.9 151 37.7
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.8e-09 66.6 119 40.3
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.8e-09 66.6 128 38.3
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 3.1e-09 65.9 139 36.0
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 6.8e-09 64.7 149 34.9
Sabra18G0025300 Salix brachista HOM05D008824 ORTHO05D003125 2.0e-08 63.2 146 33.6
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 5.8e-08 61.6 133 35.3
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.3e-07 60.5 117 35.9
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.7e-07 60.1 112 40.2
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.7e-07 60.1 135 33.3
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 2.2e-07 59.7 99 45.5
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 112 40.2
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 112 40.2
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 112 40.2
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.2e-07 59.7 131 34.4
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 3.8e-07 58.9 149 32.9
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.9e-07 58.5 115 36.5
Potri.003G070750 Populus trichocarpa HOM05D008824 ORTHO05D003125 1.1e-06 57.4 145 32.4
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 1.1e-06 57.4 129 40.3
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 1.4e-06 57.0 108 36.1
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.4e-06 57.0 127 32.3
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 2.4e-06 56.2 136 32.4
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 2.4e-06 56.2 118 36.4
Sabra06G0202600 Salix brachista HOM05D008824 ORTHO05D003125 3.2e-06 55.8 95 41.1
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.2e-06 55.5 89 41.6
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 5.4e-06 55.1 95 46.3
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 5.4e-06 55.1 112 32.1
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 5.4e-06 55.1 95 41.1
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.4e-06 55.1 87 43.7
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.4e-06 55.1 104 38.5
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.4e-06 55.1 104 38.5
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 5.4e-06 55.1 99 38.4
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 9.2e-06 54.3 87 44.8


User provided reference genes

Program Settings