Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 6.9e-114 414.1 222 100.0
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 4.2e-111 404.8 222 98.2
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 1.2e-110 403.3 222 98.2
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 4.6e-110 401.4 222 97.3
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 1.3e-109 399.8 222 97.3
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 2.8e-107 392.1 219 96.3
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.4e-106 389.0 219 95.0
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 1.4e-103 379.8 222 94.1
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 1.9e-103 379.4 222 94.1
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 1.9e-103 379.4 222 94.1
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 5.5e-103 377.9 222 91.4
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 5.5e-103 377.9 222 91.4
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 7.2e-103 377.5 219 87.2
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.6e-102 376.3 219 87.2
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 1.8e-101 372.9 219 91.8
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 3.0e-101 372.1 219 86.8
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 2.9e-96 355.5 218 82.1
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.5e-92 343.2 218 78.4
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.1e-87 327.0 219 78.1
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 8.5e-80 300.8 228 70.2
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.1e-79 300.4 227 70.5
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 4.2e-79 298.5 227 70.0
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.6e-78 296.6 227 69.6
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 3.0e-77 292.4 224 68.3
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 1.1e-76 290.4 227 67.4
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 1.5e-76 290.0 226 72.1
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 9.7e-76 287.3 230 67.8
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 2.2e-75 286.2 233 66.5
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 2.2e-75 286.2 232 66.8
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 3.7e-75 285.4 224 70.1
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 1.4e-74 283.5 190 71.1
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 2.4e-74 282.7 225 68.9
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 4.1e-74 282.0 216 70.4
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 7.0e-74 281.2 221 69.7
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 2.0e-73 279.6 192 76.0
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 1.0e-72 277.3 234 65.4
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.7e-72 276.6 203 68.0
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.7e-72 276.6 203 68.0
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 2.2e-72 276.2 234 59.0
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 2.9e-72 275.8 230 62.2
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 5.0e-72 275.0 222 68.9
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 6.5e-72 274.6 229 65.9
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 6.5e-72 274.6 215 64.2
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 6.5e-72 274.6 231 62.8
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 8.5e-72 274.2 229 64.2
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 8.5e-72 274.2 220 66.4
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 1.1e-71 273.9 197 66.5
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 1.1e-71 273.9 222 67.6
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 1.1e-71 273.9 226 69.0
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 4.2e-71 271.9 225 60.9
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 5.5e-71 271.6 228 61.4
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 5.5e-71 271.6 228 61.4
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 7.2e-71 271.2 194 70.6
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 7.2e-71 271.2 223 66.8
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 9.4e-71 270.8 223 67.3
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 9.4e-71 270.8 220 68.6
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 9.4e-71 270.8 225 66.7
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 9.4e-71 270.8 232 63.4
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 9.4e-71 270.8 203 64.5
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 1.2e-70 270.4 226 68.1
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 1.2e-70 270.4 191 74.9
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 1.2e-70 270.4 210 63.8
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 1.2e-70 270.4 228 61.0
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 1.6e-70 270.0 229 67.7
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 1.6e-70 270.0 220 69.5
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 2.1e-70 269.6 229 61.1
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 2.1e-70 269.6 180 76.7
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 2.7e-70 269.2 198 71.2
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 2.7e-70 269.2 222 66.7
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 3.6e-70 268.9 229 60.7
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.6e-70 268.9 207 64.7
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 3.6e-70 268.9 198 73.2
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 4.7e-70 268.5 209 67.5
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 6.1e-70 268.1 180 69.4
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 6.1e-70 268.1 188 67.6
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 8.0e-70 267.7 225 67.6
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 8.0e-70 267.7 225 65.8
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.4e-69 266.9 222 64.0
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 1.8e-69 266.5 202 72.3
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 3.0e-69 265.8 228 64.0
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 4.0e-69 265.4 207 63.8
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 5.2e-69 265.0 223 66.8
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 6.8e-69 264.6 179 68.2
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 1.2e-68 263.8 232 60.3
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 1.5e-68 263.5 188 72.9
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 2.6e-68 262.7 225 59.1
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 2.2e-67 259.6 209 62.7
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 3.7e-67 258.8 192 73.4
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 6.3e-67 258.1 211 67.3
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 1.8e-66 256.5 216 64.4
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 2.4e-66 256.1 231 62.3
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 9.1e-66 254.2 227 58.1
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 1.6e-65 253.4 195 68.2
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 2.7e-65 252.7 197 67.5
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 1.7e-64 250.0 202 60.9
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 8.5e-64 247.7 182 69.8
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.5e-63 246.9 181 71.8
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 7.2e-63 244.6 194 67.5
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 1.2e-62 243.8 180 70.6
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 1.2e-62 243.8 203 66.0
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 6.1e-62 241.5 201 66.2
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 6.1e-62 241.5 202 65.8
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 4.0e-61 238.8 211 62.6
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 2.8e-59 232.6 181 68.5
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 5.0e-56 221.9 202 58.9
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 3.4e-52 209.1 171 65.5
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 2.9e-51 206.1 139 70.5
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 2.7e-49 199.5 142 65.5
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-48 194.9 108 100.0
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 6.6e-48 194.9 134 67.2
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 8.6e-48 194.5 142 63.4
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.1e-47 194.1 142 63.4
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 1.9e-47 193.4 142 63.4
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 1.9e-47 193.4 142 63.4
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 1.9e-47 193.4 142 63.4
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 2.5e-47 193.0 142 63.4
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 2.5e-47 193.0 142 63.4
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.5e-47 193.0 142 62.7
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 5.6e-47 191.8 141 63.1
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 5.6e-47 191.8 142 62.7
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 5.6e-47 191.8 142 62.7
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.6e-46 190.3 142 62.7
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 2.1e-46 189.9 142 62.7
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 3.6e-46 189.1 140 62.1
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 3.2e-42 176.0 142 56.3
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 4.1e-42 175.6 184 52.7
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.1e-39 167.5 159 50.3
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 1.1e-37 161.0 219 46.1
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.4e-37 160.6 102 76.5
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 2.3e-37 159.8 132 75.0
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 1.0e-32 144.4 175 42.9
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 2.8e-30 136.3 107 70.1
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 7.6e-28 128.3 154 43.5
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 1.3e-27 127.5 172 40.1
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.9e-26 123.6 219 42.9
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 1.9e-26 123.6 129 54.3
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 9.2e-26 121.3 184 39.7
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.3e-24 116.7 187 36.4
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 7.6e-20 101.7 181 37.6
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 9.9e-20 101.3 227 40.1
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 1.7e-19 100.5 89 55.1
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 1.7e-19 100.5 71 63.4
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 6.4e-19 98.6 202 32.2
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 2.4e-18 96.7 92 55.4
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 2.4e-18 96.7 172 32.0
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 3.2e-18 96.3 170 33.5
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 6.6e-16 88.6 59 72.9
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.6e-14 82.8 95 46.3
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 5.8e-12 75.5 110 37.3
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 2.4e-10 70.1 48 70.8


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