Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01805 Brassica carinata HOM05D000906 ORTHO05D023978 3.4e-91 338.2 159 100.0
BcaNung01804 Brassica carinata HOM05D000906 ORTHO05D023978 2.7e-27 125.9 95 70.5
BolC7t44879H Brassica oleracea HOM05D000906 ORTHO05D023978 2.7e-27 125.9 95 70.5
C07p43520 Brassica napus HOM05D000906 ORTHO05D023978 2.4e-23 112.8 52 100.0
BcaB05g23406 Brassica carinata HOM05D000906 ORTHO05D000713 1.9e-12 76.6 95 49.5
BcaC04g23528 Brassica carinata HOM05D000906 ORTHO05D000713 7.1e-12 74.7 91 47.3
BcaC04g23532 Brassica carinata HOM05D000906 ORTHO05D000713 1.3e-10 70.5 94 44.7
BolC9t53645H Brassica oleracea HOM05D000906 ORTHO05D000713 1.3e-10 70.5 94 44.7
C09p07330 Brassica napus HOM05D000906 ORTHO05D000713 3.0e-10 69.3 91 44.0
Carub.0006s3635 Capsella rubella HOM05D000906 ORTHO05D000713 2.8e-08 62.8 84 42.9
Sp7g01360 Schrenkiella parvula HOM05D000906 ORTHO05D000713 3.6e-08 62.4 59 49.2
Aa31LG11G3460 Aethionema arabicum HOM05D000906 ORTHO05D000713 6.2e-08 61.6 98 36.7
BraA09t36303Z Brassica rapa HOM05D000906 ORTHO05D000713 6.2e-08 61.6 103 36.9
Thhalv10005574m.g Eutrema salsugineum HOM05D000906 ORTHO05D000713 8.1e-08 61.2 51 52.9
Carub.0006s2198 Capsella rubella HOM05D000906 ORTHO05D000713 1.1e-07 60.8 51 54.9
BcaC04g23530 Brassica carinata HOM05D000906 ORTHO05D000713 1.4e-07 60.5 103 37.9
BolC9t53646H Brassica oleracea HOM05D000906 ORTHO05D000713 1.4e-07 60.5 103 37.9
Carub.0006s2193 Capsella rubella HOM05D000906 ORTHO05D000713 2.4e-07 59.7 49 57.1
AL6G35580 Arabidopsis lyrata HOM05D000906 ORTHO05D000713 4.0e-07 58.9 85 41.2
AT5G24180 Arabidopsis thaliana HOM05D000906 ORTHO05D000713 4.0e-07 58.9 85 42.4
THA.LOC104798896 Tarenaya hassleriana HOM05D000906 ORTHO05D000713 5.3e-07 58.5 137 29.9
Manes.01G049800 Manihot esculenta HOM05D000906 ORTHO05D000713 6.9e-07 58.2 89 36.0
Aa31LG11G3450 Aethionema arabicum HOM05D000906 ORTHO05D000713 2.0e-06 56.6 81 35.8
AL6G35650 Arabidopsis lyrata HOM05D000906 ORTHO05D000713 2.0e-06 56.6 52 51.9
AT5G24230 Arabidopsis thaliana HOM05D000906 ORTHO05D000713 2.0e-06 56.6 52 51.9
Carub.0006s2199 Capsella rubella HOM05D000906 ORTHO05D000713 2.0e-06 56.6 52 51.9
CAN.G968.8 Capsicum annuum HOM05D000906 ORTHO05D000713 2.0e-06 56.6 47 53.2
Hund11666 Selenicereus undatus HOM05D000906 ORTHO05D000713 2.0e-06 56.6 41 58.5
AT5G24220 Arabidopsis thaliana HOM05D000906 ORTHO05D000713 2.6e-06 56.2 55 54.5
Manes.02G009100 Manihot esculenta HOM05D000906 ORTHO05D000713 3.4e-06 55.8 52 50.0
PSO384G2569 Papaver somniferum HOM05D000906 ORTHO05D000713 4.5e-06 55.5 92 34.8
Thhalv10004425m.g Eutrema salsugineum HOM05D000906 ORTHO05D000713 5.8e-06 55.1 99 34.3
AL6G35620 Arabidopsis lyrata HOM05D000906 ORTHO05D000713 7.6e-06 54.7 55 52.7
Carub.0006s2194 Capsella rubella HOM05D000906 ORTHO05D000713 9.9e-06 54.3 49 46.9
Carub.0006s2197 Capsella rubella HOM05D000906 ORTHO05D000713 9.9e-06 54.3 97 37.1
PSO135G0650 Papaver somniferum HOM05D000906 ORTHO05D000713 9.9e-06 54.3 74 41.9


User provided reference genes

Program Settings