Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01691 Brassica carinata HOM05D017714 ORTHO05D013199 3.6e-31 137.5 65 100.0
BolC7t45686H Brassica oleracea HOM05D017714 ORTHO05D013199 4.2e-27 124.0 65 90.8
AL7G31120 Arabidopsis lyrata HOM05D000220 ORTHO05D013199 4.9e-20 100.5 64 73.4
AT4G22505 Arabidopsis thaliana HOM05D000220 ORTHO05D013199 3.0e-17 91.3 64 68.8
Carub.0007s1883 Capsella rubella HOM05D017714 ORTHO05D013199 1.1e-14 82.8 65 58.5
CARHR229400 Cardamine hirsuta HOM05D000220 ORTHO05D013199 2.5e-11 71.6 66 56.1
CARHR229360 Cardamine hirsuta HOM05D000220 ORTHO05D038807 2.7e-10 68.2 60 51.7
AT4G22470 Arabidopsis thaliana HOM05D000220 ORTHO05D038807 3.5e-10 67.8 63 47.6
A02p32390 Brassica napus HOM05D017714 ORTHO05D013199 4.6e-10 67.4 65 52.3
BraA02t08256Z Brassica rapa HOM05D017714 ORTHO05D013199 4.6e-10 67.4 65 52.3
AT4G22485 Arabidopsis thaliana HOM05D000220 ORTHO05D013199 7.9e-10 66.6 57 56.1
Carub.0009s0007 Capsella rubella HOM05D000220 ORTHO05D013199 7.9e-10 66.6 55 58.2
CARHR229370 Cardamine hirsuta HOM05D000220 ORTHO05D013199 8.7e-09 63.2 58 53.4
BraA01t01324Z Brassica rapa HOM05D017714 ORTHO05D013199 1.5e-08 62.4 55 52.7
BcaC09g51108 Brassica carinata HOM05D000220 ORTHO05D013199 2.5e-08 61.6 55 52.7
C01p16730 Brassica napus HOM05D000220 ORTHO05D013199 2.5e-08 61.6 55 52.7
BolC1t01618H Brassica oleracea HOM05D000220 ORTHO05D013199 2.5e-08 61.6 55 52.7
Carub.0007s1885 Capsella rubella HOM05D000220 ORTHO05D013199 3.3e-08 61.2 57 50.9
BcaC09g51104 Brassica carinata HOM05D000220 ORTHO05D000141 2.4e-06 55.1 68 42.6
BcaC09g51107 Brassica carinata HOM05D000220 ORTHO05D000141 2.4e-06 55.1 68 42.6
BolC1t01617H Brassica oleracea HOM05D000220 ORTHO05D000141 2.4e-06 55.1 68 42.6
BraA01t01323Z Brassica rapa HOM05D000220 ORTHO05D000141 2.4e-06 55.1 68 42.6
AUR62007497 Chenopodium quinoa HOM05D000220 ORTHO05D000141 6.9e-06 53.5 66 43.9
THA.LOC104806334 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 9.0e-06 53.1 65 46.2
THA.LOC104812996 Tarenaya hassleriana HOM05D000220 ORTHO05D407007 9.0e-06 53.1 63 42.9


User provided reference genes

Program Settings